Protein

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Genbank accession
WEM34260.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATVESRTDKYDLGDVVKDVQIVPYIRSRSVEFYATKMKPNTRVYAFFDGQAVSEFCRDIGFQLSAANAGTASQLVEFGSPLITDANGELRGEFKIPGGRFFTGEKEFVLSDDPGLTGDADMQTTSSKAAYFAGGINVTKQNVTLNVVSTIVIPETVNPARAAPEPAPAPPAPDPACLSHQKKYHPTNYREICQCIAGGGTAGACGDPIAQAFIVDNDMFITSIDLFFKQVDLFSDRVFVQIRDMANGYPGTTVIAQKYYSPDQIQPFASDDSSKAFKVVFDQPVFLESNTQYCFVVGGYSPNTRLWVSRLGEEVTNMPGKIVEQQTTTEVSFRSLNGTTWNAEQYEQIKYRLYKANFTPGTMNLVFENAHEDEEVVLPENPFQTQTGQSRVRVFLRDHGLTTGDRISMSLTSDTPFTINVSDFVPQVGQTMHTTTGKGIISDIKSTATANQYEVTLKDISGVFTAGQTYSCDAKTREVRDWYLISSIDTKKPASYTLNQCFGTVVTNSYGAKYPGGTIAGIPVSEFNTEHVTGSLGHSIVEVCSVDSFIINLTTPATMTGRFGGSGITCYNGGGKFDVFNVSGAYMPYRSSENWTLTGVGHGDTSSLFEAANYQTQAPVSFVPQEDKFLGQPLKIASANNEQIMLGTGNRSVTVSATFNSTDATSTPMVNMDTFSAILISNRSEWQEKSKMTSIPYDATQPVWHAEEEIVNGSEIYKYVTRTVNLENAANDLYLYVDAYKDLNADFDVYFKVLPVYASGSIEARPWIKANALTKSRSSVDTSDLVEYKVVASEHCTAYTSEGVNYSGWAEDPFTAFKIKLVGRSKNSAKPVLFESLRAIAIT
Physico‐chemical
properties
protein length:843 AA
molecular weight: 92338,19680 Da
isoelectric point:4,99373
aromaticity:0,10676
hydropathy:-0,25077

Domains

Domains [InterPro]
DC_0082
RBD
2–843
DC_0082
IPR038648
Unmapped
175–357
IPR038648 IPR023366
WEM34260.1
1 843
Architecture
RBD
STR
RBD
RBD 2-377 | STR 378-472 | RBD 473-843
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WEM34260.1
1 843
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,7429
Central domain 171 640 471 0,6314
C-terminal 641 843 202 0,6834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-640
C-terminal
641-843

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage X1
[NCBI] 		2511832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris str. 8004
[NCBI] 		314565 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas campestris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEM34260.1 [NCBI]
Genbank nucleotide accession
OQ427096 [NCBI]
CDS location
range 35072 -> 37603
strand +
CDS
ATGGCAACTGTAGAATCAAGAACCGACAAATACGATCTGGGCGACGTTGTAAAGGACGTCCAGATCGTTCCTTACATCCGTAGCCGAAGCGTTGAGTTTTATGCTACCAAGATGAAGCCAAACACGCGAGTCTACGCGTTCTTCGACGGTCAAGCCGTTTCGGAGTTCTGCCGAGACATTGGTTTCCAGCTTAGCGCTGCTAACGCTGGAACTGCCTCGCAGCTTGTTGAGTTTGGTTCACCTCTGATCACTGACGCTAACGGTGAGCTCCGCGGCGAGTTCAAAATCCCGGGCGGTCGATTCTTCACCGGTGAGAAGGAGTTTGTCCTTTCGGATGACCCAGGTCTCACTGGCGATGCAGATATGCAGACGACCAGTTCTAAGGCAGCCTACTTCGCTGGCGGTATCAACGTCACCAAGCAGAATGTCACACTGAACGTCGTTTCGACAATCGTAATCCCTGAAACGGTTAACCCAGCACGCGCTGCCCCGGAACCTGCTCCGGCGCCTCCTGCACCAGATCCAGCTTGCCTTAGCCATCAGAAGAAGTATCACCCGACCAATTACCGTGAAATCTGCCAGTGTATCGCAGGCGGTGGCACGGCTGGTGCGTGTGGTGACCCGATCGCACAGGCGTTCATTGTAGACAACGACATGTTCATCACGTCGATCGATCTGTTCTTCAAGCAGGTCGACCTGTTCAGTGATCGCGTGTTCGTACAAATCCGTGATATGGCAAACGGCTACCCAGGTACCACTGTCATTGCACAGAAGTACTACAGCCCAGACCAGATTCAGCCATTTGCATCTGATGATTCGAGTAAGGCATTCAAGGTCGTATTCGATCAGCCAGTGTTCCTAGAGTCGAACACCCAGTACTGTTTCGTTGTTGGTGGTTACTCTCCAAACACTCGCCTATGGGTCTCTCGCCTTGGTGAGGAAGTGACAAACATGCCAGGCAAGATCGTTGAGCAGCAGACGACCACTGAGGTCAGCTTCCGTTCACTCAATGGTACGACTTGGAATGCAGAACAGTATGAACAGATCAAGTATCGTCTCTACAAGGCAAACTTCACTCCAGGTACGATGAACCTTGTGTTCGAGAATGCACATGAAGATGAAGAAGTTGTTCTTCCTGAGAATCCGTTCCAGACCCAGACAGGTCAGTCGCGCGTCCGTGTCTTCCTGCGTGACCACGGTCTGACCACTGGTGACCGTATCTCGATGAGCCTGACAAGTGATACACCGTTCACGATTAACGTTTCGGACTTCGTTCCGCAGGTTGGTCAGACGATGCACACCACGACCGGTAAGGGTATCATCTCAGACATCAAGTCAACTGCTACTGCCAATCAATATGAAGTAACACTCAAGGATATCTCCGGTGTGTTCACTGCAGGTCAGACCTACTCCTGCGATGCAAAGACTCGCGAGGTTCGTGACTGGTATCTGATTAGCTCCATCGACACCAAGAAGCCAGCCAGCTACACACTCAACCAGTGCTTCGGTACGGTTGTCACTAACTCGTACGGCGCAAAGTATCCAGGTGGTACTATCGCAGGCATTCCTGTGTCCGAATTCAACACCGAGCACGTAACCGGTTCGCTGGGTCACTCGATTGTCGAAGTATGCTCGGTTGACTCGTTCATCATCAACCTGACCACACCTGCTACGATGACTGGTCGTTTCGGCGGAAGCGGCATCACATGCTACAACGGTGGTGGTAAGTTTGACGTGTTCAACGTCTCAGGTGCGTACATGCCTTATCGTTCCTCTGAGAACTGGACACTCACAGGCGTTGGTCATGGTGACACTAGTAGCCTGTTTGAGGCAGCCAATTATCAGACTCAGGCTCCGGTATCGTTTGTTCCACAGGAAGATAAGTTCCTTGGTCAGCCACTGAAGATTGCGTCAGCAAACAACGAGCAGATCATGCTCGGTACAGGTAACCGTTCGGTGACTGTCTCAGCTACGTTCAACTCAACGGATGCGACTAGCACTCCTATGGTCAACATGGACACCTTCTCGGCGATTTTGATCAGTAACCGTTCTGAGTGGCAAGAGAAGTCGAAGATGACTTCGATTCCATACGACGCTACCCAGCCTGTATGGCACGCTGAGGAAGAGATCGTCAACGGTTCCGAGATCTACAAGTATGTCACTCGTACTGTCAACCTTGAGAACGCTGCAAACGACCTCTACCTGTATGTTGATGCCTACAAGGACCTAAACGCAGACTTCGATGTCTACTTCAAGGTTCTTCCGGTCTACGCTTCGGGTTCGATTGAGGCACGTCCTTGGATCAAGGCAAACGCACTGACCAAGTCTCGTTCTTCGGTTGACACATCTGATCTGGTAGAGTACAAGGTTGTCGCTTCTGAGCACTGCACCGCATACACTTCGGAAGGCGTCAACTATAGCGGCTGGGCAGAAGATCCGTTCACTGCATTCAAGATCAAGCTCGTTGGTCGTTCTAAGAACTCAGCCAAGCCTGTACTGTTTGAATCACTAAGAGCAATCGCAATCACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
afc6c1f095b54576204cc6cbf65de4c7479df57a631a8a6e2b5f16e291cd2a27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5392
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50