Protein

View in Explore
Genbank accession
WJE88142.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFTIGGTSNRGFYPFEPTGSLRFEDGDSPYLQRTPTTAGNLKTWTFSCWIKRGNISEQSNIFNPYYGGDGSNESQFYFHSDDTLRIYDSGALRLDAKTSALFRDASAWYHIVLRVDTTQATDSDRLRIYVNGEEATIANGGNGGPTYPTQNQTLGWNGTSAHYVGSYRGSNHYLDGYMAEIYHVDGTSHDADTFGETKNGVWVPKDAKGSLTFGTNGFYLPFNSTVTAEGQSTVLYEGTGATQSVQGMGYKADLVWLKNRSATSNHALSDRVRGASRTIYPNLTAAQDYLGANQLGSFNDDGFTILGSANNHNDSGEEYVAWAWDAGADQTPTGFGCVTWRGSGGANRAVRDVGFKSDLVWVKTRDAANDHNLFDSVRGATKRLRPSGTNAEATDVNSVVSFDDDGFTVDTNADYNGSSNDYVAWCWDAGDGDPVSNTDGSTTTTVKASDTHGFSIVTYQGNGTVGNTIGHGLNGTPDVMFIKGLENTQNWVVYHKSLSATTKGLALNTTAAENQPFQANQMTATTMGLDGSSSMNGNGLDYVAYFWKEVSGYSKFGSYTGTGSAGNAVTGLGFRPAFVMIKRTDSAGSWYIHDSTRNPHNPAEDLLSPNNSDAEATFSNNKIDLDSDGFTIQGTAGDHNASGGSYIYMAFAGGLDTIAPVNTDGSIDSRVKASDDTGFSIVRYRGTGANATISHGLSSAPDWIVTKGLSTSGRSWAVYHSGIASDAETDYLLLNSTAAAADNNIYWNDTAPTSSVFSVGTASNTNQSGVDFIAYCWTATTGKSAFGSYTGNGSATGPEVTGLGFEPGLVILKNTDDVTNWYIYDDKRGGLEDNDEVLLPNSNLAESSNFGVDIDLNDDGFQVVTSSSRINGSGHNVIYMAFADGRDASFFHDESGQDNHFEPENVQNYDVVPDSPTNNFATMNPLNWNVMTFAEGNLKISTTTNNRAVHSTFALPSSGKWIYEFRATDYTSGGGAYIGFSNNMNEGDNEFTGDHGIFYQTYNGGFNVEGTVSTATGYSVGSTNFTADGDMHTIAIDVDNQKLYFAKNGNWRNDADPAAGTGGLDISSCFTSPETSFSPCITRGGSYNEVYHFNFGQDDSFAGTVTPGGYTDANERGSFKYPVPDGFLSLCTANLPEPDISPSNGQEPEDYFNTVLYTGTGAELAVTGVGFQPDWVWAKERNNAEPHRLFDSVRGATKALESDSAAAENTNAQFLKTFDSDGFTLGTSYPNNSGDTYVAWNWLAGGTAVSNTDGTVTADVSASAKSGFSIVSWDGADASAGSTIGHGLGKAPSFIVMKNRNLSSGNWHAYHKSLTADYGIVLNLTNQKTNDSGFWNDTEPTSSVFTVGTYGATTGDHIAYCFSEIEGYSKFGTYTGAGDGTFVHLGFRPAWLMVKNTDTSSHHWAIYDDTRDTYNVNDLYLYANSSSVESDNDRVDFVSNGFVGRANNYDIAQSGVNFIYIAFARNPFKYAQAR
Physico‐chemical
properties
protein length:1474 AA
molecular weight: 158332,06690 Da
isoelectric point:4,56692
aromaticity:0,12076
hydropathy:-0,47232

Domains

Domains [InterPro]
IPR013320
STR
19–185
IPR013320 DC_1107 IPR055906 IPR055906
G3DSA:2.60.120.200
STR
22–185
G3DSA:2.60.120.200 IPR055906 IPR055906 DC_1713
WJE88142.1
1 1474
Architecture
STR
ATT
STR
STR
STR
STR 19-185 | ATT 186-339 | STR 340-652 | STR 661-1137 | STR 1148-1467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJE88142.1
1 1474
Domain Start End Length (AA) Confidence
N-terminal 1 910 910 0,0204
Central domain 911 1109 200 0,3638
C-terminal 1110 1474 364 0,9581
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-910
Central
911-1109
C-terminal
1110-1474

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage C72C1
[NCBI] 		3053736 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJE88142.1 [NCBI]
Genbank nucleotide accession
OQ984150 [NCBI]
CDS location
range 30272 -> 34696
strand -
CDS
ATGTTTACCATTGGCGGCACCAGCAATCGCGGTTTCTATCCATTCGAGCCTACCGGCAGTCTGCGCTTTGAAGACGGCGACAGTCCCTATTTACAGCGCACCCCGACCACGGCTGGCAATTTAAAAACGTGGACGTTTAGCTGTTGGATTAAGCGCGGGAATATCAGTGAACAATCAAACATTTTTAATCCATATTACGGCGGCGATGGCTCAAACGAATCTCAGTTCTATTTCCATTCAGACGACACTTTAAGAATTTATGATTCTGGTGCGTTGAGACTTGATGCTAAAACAAGCGCATTATTTAGAGATGCGTCTGCGTGGTATCATATTGTTTTGCGTGTTGATACTACACAAGCCACAGATAGCGACCGCTTGCGAATATATGTTAATGGCGAGGAAGCCACGATTGCCAATGGCGGGAATGGTGGCCCCACCTATCCAACACAGAATCAAACTTTGGGCTGGAACGGAACCAGCGCACACTATGTCGGTTCATATCGCGGCTCAAATCATTATTTAGATGGTTATATGGCTGAGATTTATCATGTAGACGGCACGTCTCATGACGCTGACACATTTGGCGAAACAAAGAACGGCGTATGGGTTCCGAAGGACGCAAAGGGCAGTCTGACATTCGGCACAAACGGGTTCTATCTGCCATTCAACAGCACCGTCACAGCAGAGGGTCAGTCCACAGTTCTGTATGAAGGCACAGGCGCAACGCAAAGTGTGCAGGGCATGGGATACAAGGCTGATTTAGTCTGGCTGAAAAACAGGTCAGCGACCAGTAATCATGCCTTGTCTGACAGGGTTCGTGGAGCAAGCCGCACTATTTACCCTAACTTGACTGCGGCTCAGGACTATTTAGGTGCTAATCAATTAGGCTCGTTTAATGATGACGGGTTTACTATTCTAGGCAGCGCAAACAATCACAACGACAGCGGTGAAGAATATGTAGCATGGGCGTGGGATGCTGGCGCAGACCAGACCCCGACAGGCTTCGGCTGTGTGACATGGCGTGGCTCTGGCGGTGCAAACAGGGCTGTGCGGGATGTCGGGTTTAAGTCTGACCTAGTCTGGGTGAAAACACGGGATGCGGCAAACGACCATAATCTTTTTGACAGTGTGCGTGGCGCAACAAAAAGACTTCGCCCTAGCGGTACAAACGCAGAGGCAACAGACGTTAATTCTGTTGTGTCTTTCGATGACGATGGCTTCACTGTTGATACAAACGCTGATTACAACGGGAGTTCAAACGACTATGTGGCATGGTGCTGGGATGCTGGTGATGGCGACCCTGTAAGCAATACTGACGGGTCTACCACAACAACAGTAAAGGCGTCTGACACTCACGGTTTCAGCATAGTAACCTATCAGGGAAACGGCACTGTCGGCAACACGATTGGGCATGGCCTGAACGGTACGCCTGATGTGATGTTTATTAAGGGGCTAGAAAACACACAGAATTGGGTGGTTTATCACAAGAGCCTATCCGCAACGACTAAGGGGTTGGCGTTAAATACAACGGCGGCAGAGAATCAGCCTTTTCAAGCAAATCAAATGACAGCGACCACAATGGGGCTTGATGGGTCAAGCTCCATGAATGGAAACGGCCTTGATTATGTTGCGTACTTTTGGAAAGAGGTATCAGGCTATTCGAAATTCGGTTCATACACCGGCACAGGCTCTGCTGGAAATGCTGTGACGGGTCTGGGTTTCCGTCCTGCTTTTGTCATGATTAAACGCACTGATTCCGCAGGAAGCTGGTACATACATGACAGCACAAGAAACCCTCACAACCCTGCGGAAGATTTGTTAAGCCCAAACAACAGTGATGCTGAAGCAACTTTTTCAAACAACAAAATTGACCTTGATTCAGATGGTTTTACCATTCAAGGAACTGCTGGCGACCACAACGCATCAGGCGGCTCATATATCTATATGGCTTTTGCTGGCGGTTTGGACACCATTGCACCCGTCAATACAGACGGGTCTATTGACAGCCGCGTAAAGGCATCAGACGATACTGGCTTTTCGATTGTGCGGTATCGAGGCACAGGCGCAAACGCTACTATTTCGCATGGTTTGTCATCTGCGCCTGATTGGATTGTTACCAAAGGATTAAGCACCTCTGGCAGAAGCTGGGCAGTTTATCATTCGGGAATAGCTAGTGATGCAGAAACAGATTATTTATTGTTAAACAGCACAGCCGCCGCTGCTGATAATAATATATATTGGAACGACACTGCGCCAACATCTAGTGTGTTTTCTGTAGGCACAGCTTCAAACACAAACCAAAGCGGTGTTGATTTTATAGCCTACTGCTGGACTGCCACCACAGGCAAGTCAGCCTTCGGCAGTTACACTGGCAACGGGTCAGCAACAGGGCCAGAGGTTACGGGGCTAGGTTTCGAGCCGGGGCTGGTCATACTGAAGAACACTGACGATGTGACCAACTGGTACATCTATGATGACAAACGCGGTGGGCTTGAAGATAATGATGAGGTGTTATTGCCAAACTCGAACCTCGCAGAATCATCTAACTTCGGCGTTGATATTGATTTGAACGATGACGGTTTTCAAGTTGTCACGTCTAGCAGTCGAATAAATGGTAGTGGTCATAACGTGATTTATATGGCCTTTGCTGATGGCCGAGATGCTTCGTTTTTCCACGATGAGTCAGGTCAGGACAATCACTTCGAGCCTGAAAACGTGCAGAACTATGATGTGGTGCCGGACAGCCCGACAAATAACTTTGCCACGATGAATCCGTTGAACTGGAATGTGATGACGTTTGCAGAGGGCAATCTGAAAATATCCACAACGACAAACAACAGAGCCGTCCATTCAACATTTGCTCTGCCTTCATCTGGAAAATGGATATACGAGTTCAGAGCCACAGACTACACATCTGGCGGCGGGGCTTATATTGGTTTCTCAAACAATATGAACGAAGGTGACAACGAGTTTACAGGCGACCACGGCATTTTCTACCAGACATATAACGGCGGGTTTAATGTTGAAGGCACCGTATCAACAGCAACTGGTTATTCTGTAGGCAGTACAAACTTCACAGCAGATGGTGATATGCACACCATTGCAATAGATGTGGACAACCAAAAGCTATACTTTGCCAAAAACGGAAACTGGCGGAATGACGCTGACCCTGCGGCTGGTACTGGTGGTCTTGATATTTCAAGCTGTTTCACCAGCCCCGAAACATCGTTTTCCCCATGTATAACAAGAGGCGGTTCATACAACGAAGTCTATCATTTCAACTTCGGTCAAGATGACAGCTTTGCTGGTACGGTAACACCAGGCGGCTACACTGATGCCAATGAACGTGGCTCGTTCAAGTATCCTGTGCCTGACGGGTTCCTGTCGCTGTGTACTGCTAACCTGCCAGAGCCTGACATCAGCCCTTCTAACGGGCAGGAGCCAGAGGATTATTTCAATACGGTGCTGTATACTGGCACTGGTGCAGAGCTTGCTGTAACTGGTGTAGGTTTTCAGCCCGATTGGGTTTGGGCGAAAGAACGCAATAACGCAGAGCCTCATCGTCTTTTTGATTCGGTGAGAGGTGCGACAAAGGCTTTGGAGAGTGACAGCGCCGCCGCAGAAAATACAAACGCTCAGTTTTTAAAAACTTTCGATTCAGACGGCTTTACATTAGGCACGAGCTACCCAAATAATAGCGGCGACACCTATGTCGCATGGAACTGGCTGGCTGGCGGCACTGCGGTCAGCAACACTGATGGCACAGTCACAGCGGATGTGTCTGCCAGCGCAAAGTCAGGGTTCAGCATAGTAAGCTGGGATGGTGCTGATGCGTCTGCTGGTTCAACAATAGGTCACGGCCTCGGCAAGGCCCCGTCTTTCATTGTGATGAAGAACAGAAATTTAAGCTCGGGCAACTGGCATGCTTATCATAAAAGTTTGACCGCCGACTACGGTATTGTTTTGAATCTTACAAACCAGAAAACAAATGATTCTGGATTCTGGAATGATACAGAGCCAACTTCTTCTGTGTTTACTGTTGGCACTTATGGCGCGACAACTGGTGACCACATTGCGTATTGTTTCAGCGAAATTGAAGGCTATTCAAAGTTCGGCACATACACGGGGGCTGGTGATGGCACGTTTGTCCATCTAGGCTTCCGCCCCGCATGGCTCATGGTGAAAAACACTGACACATCATCTCACCATTGGGCCATCTATGATGACACAAGAGACACCTACAACGTCAATGACCTTTATCTGTACGCTAACTCCAGCAGTGTTGAGAGTGACAATGACCGTGTGGATTTTGTCAGCAATGGCTTTGTTGGCAGGGCAAACAACTATGATATCGCACAAAGCGGTGTGAATTTTATTTATATCGCATTTGCGAGAAACCCATTCAAGTACGCACAGGCACGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4a749e8908c7199fa1678659d6d86ed3991973be6c0030535608f40d2f8a6e30
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8950
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Hecatomb: An End-to-End Research Platform for Viral Metagenomics Roach,M.J. 2022 — GenBank