Protein

Genbank accession
AUR98431.1 [GenBank]
Protein name
pectin lyase fold/virulence factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPISTSTNRTGGVNKTLDALEAEYLTAIQGAGGVSIGTWTSGVTTFTEYNEYSVFNGIPYKPRTSATLPYVAQGVDPTVAPDDANVQPYVELSPSTLSNYTDIVYKASGGNSAIDNMLTEFNLNPLMYAVGTVIKTGGTTWVYEDSTGPVTSDNFRAFNTVNVVDFGAVGDADLDTQTGTSDTDSFKAAIEAARKYNSTIYAPSAGTRKGYLIDDTLFFGPKQEADVAVFPPRNVCLGLVGSGDESTYLVCGAGISGKVLLDYTGLGHKYASGFGIWSEIEAQAPSVGILTARFKKNVGVTGNYGGQFKDVAMFKYFTIAGRLAITTEETREERINIRNDHTDSYACFVSTSDGSSESYSGGPTWNALLGEQSQSALLREDVPGSNLHQTHIKCDYYYGNNSPDPLKNPAMLRIDGANGFSIRDPFFNNNTALIDCVQIRKAGAAGIPSAISVINPLYHQKTKCGVRVMTGLNRLDLEQSSTLPGFLFDEAELVIDGFLSGATVEAVNSVIQNEPIEDCTFSYVAASFNQGNTVTNCEMEAIGTYSQTNNSAISNSKVTCKEFTWNTDSTITNTDITVRNNLNALGSRGGSPKFFLTYKGSQYAIEGQIPSSWLGTPSGIPEDALSYSTTNLRTNQELYSRTVDKIVQKIGIENTGYSASMTQYEAPSGIGQDFNYVNAIRGGVQEFSLLRNGVTIHHLNVGGPVITSPNGSKYRIVVDDLGNLSTVSY
Physico‐chemical
properties
protein length:763 AA
molecular weight: 81721,68640 Da
isoelectric point:4,76870
aromaticity:0,09174
hydropathy:-0,23657

Domains

Domains [InterPro]
IPR012334
192–288
IPR012334
IPR011050
193–615
IPR011050
AUR98431.1
1 763
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.250.O._10N.261.55.E11
[NCBI] 		1881443 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98431.1 [NCBI]
Genbank nucleotide accession
MG592617 [NCBI]
CDS location
range 56901 -> 59192
strand +
CDS
ATGGCAACTCCCGGTGGTTTGGTCGACAAGCAAGAGCTTATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTAAACTCTAAGGACGCTTCGGGCGCTCCTATCTCTACATCTACGAACCGTACAGGCGGCGTGAATAAAACACTCGACGCGCTTGAAGCGGAGTACCTTACTGCCATTCAAGGCGCAGGTGGCGTGTCGATTGGTACGTGGACTTCAGGCGTGACGACATTCACCGAGTATAACGAATACTCCGTGTTTAACGGTATCCCGTACAAACCTCGAACCTCCGCGACTCTGCCGTACGTAGCGCAAGGTGTCGACCCAACAGTCGCGCCGGACGACGCGAACGTGCAGCCTTACGTGGAATTGAGCCCCTCAACGTTATCAAACTACACAGATATAGTTTACAAAGCTTCAGGTGGTAATTCAGCTATAGACAATATGCTGACAGAGTTCAACCTAAACCCTCTTATGTACGCAGTCGGAACGGTAATCAAAACCGGCGGCACGACGTGGGTGTACGAAGACTCTACAGGACCTGTAACATCGGATAACTTCAGGGCGTTCAATACTGTTAACGTCGTTGATTTTGGCGCGGTAGGTGATGCAGACTTAGATACGCAGACAGGAACTTCTGATACGGATTCGTTCAAAGCAGCGATAGAGGCAGCGAGGAAGTATAATTCAACAATATACGCCCCGAGCGCCGGAACTCGAAAAGGCTACCTTATAGACGATACGCTTTTCTTCGGCCCTAAACAGGAAGCTGATGTTGCGGTTTTCCCGCCAAGAAACGTATGTCTAGGCTTGGTAGGCTCGGGGGATGAATCTACCTACCTAGTATGCGGGGCGGGTATCTCAGGTAAGGTTCTTCTGGATTACACAGGCCTAGGTCATAAATATGCAAGCGGCTTCGGGATATGGAGCGAAATAGAAGCTCAAGCACCTTCTGTTGGTATACTAACCGCAAGATTTAAAAAGAACGTAGGCGTAACAGGTAACTACGGCGGTCAGTTTAAAGATGTGGCTATGTTTAAATACTTTACCATCGCCGGAAGACTTGCAATAACGACCGAGGAGACGAGAGAAGAAAGGATTAATATAAGAAACGATCATACGGACTCTTACGCTTGTTTCGTTTCAACATCGGACGGCTCTAGTGAATCTTATTCGGGTGGTCCAACTTGGAACGCGCTACTAGGAGAGCAGTCTCAAAGCGCGCTTTTGCGTGAAGATGTTCCAGGTAGTAACCTACACCAGACACACATTAAATGTGATTACTACTACGGCAATAACAGCCCTGACCCACTGAAAAACCCTGCGATGCTTAGGATTGACGGAGCAAATGGGTTCTCTATTCGTGACCCGTTCTTTAATAACAACACCGCTCTGATTGACTGCGTTCAAATAAGAAAAGCCGGTGCTGCGGGTATTCCGTCAGCAATATCAGTGATAAATCCGCTGTACCACCAAAAAACAAAGTGTGGCGTAAGGGTTATGACAGGCTTGAATAGACTAGACCTAGAGCAGTCTAGCACCCTGCCCGGCTTCCTTTTCGATGAGGCTGAACTGGTTATAGACGGATTCCTAAGCGGGGCTACCGTAGAGGCCGTGAATAGCGTAATACAGAATGAACCCATAGAAGATTGCACATTCTCTTACGTAGCAGCGTCATTTAACCAAGGAAACACCGTAACCAATTGCGAAATGGAAGCTATTGGCACTTATAGCCAAACTAATAACTCCGCAATAAGTAACTCCAAGGTAACGTGTAAAGAGTTCACATGGAATACTGACTCTACCATCACAAATACGGACATTACAGTTAGGAATAATCTTAATGCGCTGGGAAGTAGAGGAGGGTCTCCTAAGTTCTTCTTGACTTACAAAGGGTCTCAATACGCGATAGAAGGTCAAATACCTTCATCGTGGTTAGGGACTCCTTCCGGTATTCCAGAAGATGCTCTTAGCTACTCAACAACCAACTTGAGAACCAATCAAGAACTATACTCACGTACGGTTGATAAGATAGTTCAAAAGATAGGCATAGAGAACACCGGATACAGCGCATCTATGACTCAATACGAAGCGCCTTCTGGAATTGGTCAGGATTTTAACTACGTCAACGCCATTAGGGGGGGTGTTCAAGAGTTTTCACTATTAAGGAACGGTGTAACTATCCATCACCTTAATGTCGGTGGTCCTGTGATTACATCCCCAAACGGGTCTAAGTATAGAATTGTTGTGGATGATTTAGGTAACTTATCTACGGTAAGTTACTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
bc527d47563df275e0db75f41cf3b352f5faf9948c4452dd806bd5bcb2a68cf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6271
Evidence 0,6271
Download PDB

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank