Protein

View in Explore
Genbank accession
XWX36094.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLQKLTDVATNINVSTAENGFIGANFYTEDDGSAYIRITIRDNNEVLDFNKTDMTPRLDLFSSDGSIFTNEPLEVILPEYGVIQYKVSDNVIKHAGKVDAKLFLANKKDSVHVANFYFTITDSGMTGPIGKEIHVDSLQDLVRNVMKENAIGLLDDNFKDKLENDLKVYVKENSDTFKGEQGIQGPQGVQGETGIQGPKGDKGDKGADGINGEMGPVGPMGPKGDTGEKGLQGEVGPRGTQGPEGPKGEPFTYDDFTPEQLASLQGPKGDTPTLPDFSNWQKYKLVSDNGNQITNFNSNNRMTNENLLSAKPGFYYNYEYKDSPSEATGFVYVTENASGDKKIYFSSYNVNDLYIKTYTESIGWLEWEKISNDYTDTGWIPLAIKNDYEIITDLNYKSSYRVIDYGNYKKVFVRLGVMDNSPRNENVVASIPKELNPYDVYGFGVSHIHGDAVKLRIAGGDITLKLNAFYENVDVYYQGEWII
Physico‐chemical
properties
protein length:483 AA
molecular weight: 53698,97910 Da
isoelectric point:4,67139
aromaticity:0,10973
hydropathy:-0,57992

Domains

Domains [InterPro]
DC_0885
STR
1–435
DC_0885
G3DSA:2.60.40.3350
ATT
8–126
G3DSA:2.60.40.3350 IPR050149
IPR018913
ATT
11–146
IPR018913 G3DSA:1.20.5.320
IPR008160
STR
178–234
IPR008160
XWX36094.1
1 483
Architecture
ATT
STR
ATT 1-146 | STR 147-435 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_89
[NCBI] 		2815641 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX36094.1 [NCBI]
Genbank nucleotide accession
MZ417349.1 [NCBI]
CDS location
range 37998 -> 39449
strand +
CDS
ATGTTACAAAAACTTACAGATGTTGCTACTAATATAAATGTTAGTACAGCTGAGAACGGTTTTATTGGCGCTAATTTTTATACAGAAGATGACGGATCAGCTTATATAAGAATCACTATCAGAGATAACAACGAAGTGTTAGATTTTAACAAAACTGATATGACTCCTCGTTTAGATTTGTTTAGTTCAGATGGCTCTATATTCACCAATGAACCGTTAGAGGTTATCTTACCTGAATACGGCGTTATACAATATAAGGTTTCTGACAATGTCATTAAACATGCAGGGAAAGTAGACGCGAAATTATTCTTAGCTAATAAAAAAGACAGTGTGCACGTAGCTAACTTTTATTTCACTATTACAGACAGTGGAATGACCGGACCGATTGGCAAAGAAATACATGTAGATTCATTACAAGATTTAGTTAGAAATGTTATGAAAGAGAATGCTATAGGATTATTAGATGATAATTTTAAAGATAAGTTAGAAAATGATTTAAAGGTATATGTGAAAGAAAATTCAGATACATTTAAAGGGGAGCAAGGTATTCAAGGACCTCAAGGCGTTCAAGGAGAAACTGGGATACAAGGTCCTAAAGGTGACAAAGGTGATAAAGGAGCAGATGGAATAAATGGCGAAATGGGTCCAGTAGGTCCAATGGGTCCAAAAGGCGATACCGGAGAAAAAGGTTTGCAAGGAGAAGTAGGCCCAAGAGGAACACAAGGTCCAGAAGGACCTAAAGGAGAACCATTCACATATGATGATTTTACTCCTGAACAATTAGCAAGTTTGCAAGGACCAAAAGGTGATACGCCAACATTACCCGATTTTTCTAACTGGCAAAAATATAAATTAGTTAGTGATAATGGTAATCAAATAACTAATTTTAATAGTAATAATAGAATGACTAATGAAAACCTGTTATCTGCAAAACCAGGTTTTTACTATAACTATGAATATAAAGATTCTCCTAGTGAGGCTACAGGGTTTGTCTATGTAACGGAAAACGCCTCAGGAGATAAAAAAATCTATTTTTCTTCTTATAATGTCAATGATTTATATATTAAAACCTATACAGAATCAATTGGTTGGTTAGAATGGGAAAAGATAAGTAACGACTATACTGATACTGGTTGGATTCCACTAGCAATTAAAAATGACTATGAAATAATCACTGACCTAAATTATAAATCGTCTTATCGTGTGATTGATTATGGTAATTATAAAAAAGTGTTTGTTCGTTTAGGTGTAATGGATAATTCACCAAGAAATGAAAATGTTGTTGCGTCTATTCCTAAAGAACTTAATCCATATGATGTGTATGGTTTTGGAGTGTCACATATTCATGGTGATGCTGTAAAATTAAGAATAGCAGGAGGAGATATAACGTTAAAACTCAATGCTTTTTACGAGAATGTTGATGTTTACTATCAGGGAGAATGGATAATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dd256a2a356605bf8afaa3162b85818a8e69e0749436e9d40eaf4afeb5b3e6f7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank