Protein

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Genbank accession
URY16243.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MADLKVGSTVGGSVIWHQGNFPLNSAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTIGSSQQCGVYPGNGDAATFAMANIDIVSWNGIGFKSSQGSADRTVVINARTGDISTKGGFYATGPVRSNATAPIAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23221,32190 Da
isoelectric point:6,81610
aromaticity:0,10000
hydropathy:-0,29091

Domains

Domains [InterPro]
DC_0466
STR
1–218
DC_0466
IPR005601
STR
56–194
IPR005601
URY16243.1
1 220
Architecture
STR
STR 1-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URY16243.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,8512
Central domain 50 209 161 0,0845
C-terminal 210 220 10 0,9452
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh36
[NCBI] 		2950782 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY16243.1 [NCBI]
Genbank nucleotide accession
ON528746 [NCBI]
CDS location
range 160305 -> 160967
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACTGTAGGTGGATCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATTCAGCCGGTGACGATGTACTCTACAAATCATTTAAAATATATTCAGAATATAATAAACCGCAGGCAGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACTTACGCCGCGACTGTTCGATTTAATGGAGGAGTACATGTTCCTACTATAGGTAGTAGTCAACAGTGCGGTGTTTATCCAGGTAACGGTGATGCAGCTACCTTTGCTATGGCAAATATTGACATCGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCAGCAGACCGAACTGTTGTAATTAACGCTCGTACCGGTGATATCAGCACTAAGGGCGGTTTTTATGCAACTGGTCCTGTCCGTTCTAACGCTACTGCTCCTATAGCAGCGAATGACCTTACTAGAAAGGACTATGTTGATGGAGCAATAAATACTGTTACAGCAAATGCGAACTCTAGAGTGTTGCGTTCTGGTGACACTATGACAGGTAATTTAACAGCGCCAAACTTTTTCTCACAGAATCCTGCATCTCAACCTTCACACGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba79777679201a150cdc80819b22aaf817bd423f22ece9a4a67851d48a82717a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank