Protein

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Genbank accession
YBB94815.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLVSGITESLSNTKSETEIGIGGYRLFARVRETINYRNIVPTDTLEDGSNSTDDIINEPITISIEGVVSDLFVEDKQYPQLISKDFSSVGEVTALLPAKSQQQIQRISQIDSQIRDAVLAAERAERLAGKPYEFFGNSGNSAKTEQEKFIDFMEALYFSRQPTEVSVNFRDYKNMALVSFIPVRDNNTKDTRFTADFQQINYSTLVYTPVSSPSKSVAGKVSDASNKGGQNPESNETGERSLLSSLIGG
Physico‐chemical
properties
protein length:250 AA
molecular weight: 27551,22080 Da
isoelectric point:4,74267
aromaticity:0,08000
hydropathy:-0,43840

Domains

Domains [InterPro]
DC_0601
STR
1–250
DC_0601
IPR048494
ATT
31–211
IPR048494
YBB94815.1
1 250
Architecture
STR
ATT
STR
STR 1-30 | ATT 31-211 | STR 212-250
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_Vp_PvVp11
[NCBI] 		3394205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YBB94815.1 [NCBI]
Genbank nucleotide accession
PQ374832.1 [NCBI]
CDS location
range 734 -> 1486
strand -
CDS
GTGAGCCTAGTTAGTGGAATTACGGAATCTTTAAGTAACACAAAATCCGAGACTGAAATCGGGATTGGTGGATATCGACTTTTTGCAAGAGTAAGGGAGACGATTAATTATAGAAATATCGTCCCGACAGATACCCTTGAAGACGGCTCAAATTCAACTGATGATATCATTAATGAGCCGATAACGATTTCTATTGAAGGCGTTGTTAGCGATCTTTTTGTGGAGGATAAGCAATATCCGCAATTGATCAGTAAGGACTTTTCATCTGTTGGTGAGGTAACCGCACTACTGCCAGCAAAAAGCCAACAACAGATACAAAGAATTAGTCAAATTGACTCGCAAATAAGAGATGCAGTTTTAGCGGCGGAACGGGCAGAAAGGCTTGCGGGTAAGCCGTATGAGTTTTTTGGCAATTCAGGAAATTCAGCAAAAACCGAACAGGAGAAATTTATTGATTTCATGGAGGCTTTGTATTTTTCAAGACAGCCGACGGAAGTTTCAGTAAATTTCAGAGACTATAAAAATATGGCTCTGGTTAGCTTCATTCCAGTTCGTGATAACAACACCAAAGACACGAGATTTACTGCTGACTTTCAGCAAATAAATTACTCAACTTTGGTTTACACTCCGGTATCAAGCCCATCAAAATCCGTCGCAGGAAAAGTTTCTGATGCATCAAACAAGGGCGGGCAGAATCCAGAGTCAAACGAAACTGGCGAGAGATCATTACTTAGTAGCTTGATAGGTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aca9db4044862cc2bdd148f29f2c135188a02c399728d0b9e236b4709baa086b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7515
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage cocktail against Vibrio parahaemolyticus causing acute hepatopancreatic necrosis disease (AHPND) in Penaeus vannamei: Genomic, biological, and pathological characterization Soto-Rodriguez,S.A., Quiroz-Guzman,E., Gomez-Gil,B., Lozano-Olvera,R., Aguilar-Rendon,K.G., Serrano-Hernandez,J.M., Gonzalez-Gomez,J.P. and Chaidez,C. 2025 39900123 GenBank