Protein

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Genbank accession
ARB11265.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALEKLTQVKGSVSLYLRQLINKTISGTTNYLGYWGLTLSNSGLAGATVKFGGKVWELRSDNADISSSEPSDELWIDCGTDGFTFKSLADAKASLRIEGQGFYISSYHEGLNKGGGWFTWVPSSTAVEDDFLVIGTGSAGRHHRSVENGTVTPSDAGARGEGASSATQDTLAFLKVAACDYNVTCDYTDAGYYLTDQVSLSGTRRNWKTINLNGCDIQFVFDGSSSRNCFQMGDFSEIYGGTILNNTDPSNSNGDGSFDNPVAVGTTANVAAKNVKIHTLEIYQNLEKPCIGIWGASHDIEVDNIFLRSSERAIIGVLAHWGVDTGDFTTASVSLHPYNLKMSNVTCKNFSGLAADSFAICLSGVYNVTVDNLTAENMIGGCKVQPGTVGNSLASAEVREKILTNIRVNNINTFNVQQPAFADWSGDGVAWSGGSYDIESDIEFDGVNANESPTGGTAFIVQRLSNVTAKNLRIKNFFRAFHVLGIDGDEASDVTIDDLKAEDIKTIGGYVSGVYCKRFKLTSSEIKDCSDGTSTIANESSCLLIESPDFTIENTRLGADSSEDAYRLLALTATATGGLVKDSEYKDVRSGGYHLFNDVPVTTQINTTTPDGFNMLSSNVVLSRLDYVEVGLNLSSNQSVSTGVSSTLNLDSVDHDYYSNYNSLGFLPKTTSMYTVEGLITLRDVLGEGTVNVDVYSGSTRIKRLVSESVNLDSSRNAGVKLSGSFKAEAGSVITLKLTQDIAASLELDSDNNTGTWVDFRQL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 81873,64360 Da
isoelectric point:4,65536
aromaticity:0,08650
hydropathy:-0,18322

Domains

Domains [InterPro]
DC_1719
ATT
1–85
DC_1719 IPR059934 IPR011050
IPR011050
STR
408–555
IPR011050 DC_1579
ARB11265.1
1 763
Architecture
ATT
RBD
STR
RBD
ATT 1-85 | RBD 86-145 | STR 408-558 | RBD 559-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB11265.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,9853
Central domain 167 619 454 0,9893
C-terminal 620 763 143 0,9859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-619
C-terminal
620-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Marinomonas phage CPP1m
[NCBI] 		1965370 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Murciavirus
Host Marinomonas mediterranea
[NCBI] 		119864 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Oceanospirillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB11265.1 [NCBI]
Genbank nucleotide accession
KY626176 [NCBI]
CDS location
range 40950 -> 43241
strand +
CDS
TTGGCACTAGAAAAACTAACACAAGTTAAAGGTAGCGTCTCATTATACCTTAGACAGCTTATTAATAAAACTATCTCTGGGACAACTAATTACCTTGGTTACTGGGGACTGACACTATCTAATTCAGGTCTAGCTGGAGCAACCGTTAAGTTCGGCGGTAAGGTCTGGGAGCTAAGATCAGATAATGCAGACATCAGCTCATCTGAACCGAGTGATGAATTATGGATAGACTGCGGAACTGACGGGTTTACGTTCAAGTCGCTTGCAGATGCTAAAGCTTCTCTTAGAATAGAAGGTCAGGGATTCTATATAAGCTCTTATCATGAAGGCTTAAACAAGGGCGGTGGCTGGTTCACTTGGGTGCCATCTTCAACAGCGGTCGAGGATGACTTTCTTGTTATCGGCACTGGCTCAGCAGGCAGGCACCACAGATCAGTTGAAAACGGGACAGTTACGCCGTCAGATGCAGGAGCAAGAGGGGAAGGGGCATCATCAGCTACGCAAGATACGCTCGCATTCTTAAAAGTCGCAGCATGCGACTACAATGTCACTTGTGACTATACAGATGCAGGGTACTACTTGACAGATCAAGTGTCGTTGAGTGGAACAAGACGAAATTGGAAAACAATCAATCTTAATGGGTGCGATATTCAGTTCGTGTTCGATGGGTCGTCCTCACGAAACTGTTTCCAAATGGGAGACTTCTCTGAAATATACGGAGGGACGATCCTAAACAATACTGATCCTAGTAACTCAAACGGGGATGGCAGCTTTGATAATCCTGTGGCTGTAGGCACGACAGCTAATGTAGCAGCTAAAAACGTCAAGATTCATACACTAGAGATCTATCAGAATCTAGAGAAGCCCTGCATAGGCATATGGGGAGCGTCACATGATATAGAGGTTGACAACATCTTCCTACGCAGCAGCGAAAGAGCCATTATAGGGGTCTTAGCTCATTGGGGGGTAGATACGGGCGATTTCACGACAGCTTCGGTTTCTTTGCATCCGTACAATTTGAAGATGAGTAATGTTACATGTAAAAACTTTTCGGGTCTAGCTGCGGACAGCTTCGCCATATGCCTCAGTGGAGTTTACAACGTAACTGTAGACAACTTGACAGCAGAGAATATGATAGGAGGCTGCAAAGTGCAGCCAGGGACTGTGGGTAATTCGTTAGCTTCGGCAGAAGTTCGAGAGAAAATTCTAACTAATATCCGAGTTAACAACATTAATACATTCAATGTACAACAACCAGCGTTTGCAGATTGGTCAGGCGATGGGGTTGCTTGGAGCGGGGGTTCTTATGATATCGAATCAGACATTGAATTTGATGGGGTAAATGCTAATGAAAGTCCTACAGGTGGGACAGCTTTTATAGTGCAGCGTCTTTCTAATGTCACAGCAAAGAACTTGAGAATCAAGAACTTTTTCAGAGCGTTTCATGTCTTGGGTATAGATGGGGACGAGGCATCAGACGTAACAATTGACGACTTGAAAGCAGAGGATATTAAAACTATCGGTGGTTATGTCTCTGGCGTTTATTGCAAGAGATTTAAGCTAACAAGCTCTGAAATTAAAGACTGTTCAGACGGAACTAGCACTATAGCGAATGAGTCTAGCTGTCTACTGATAGAGAGTCCTGATTTTACTATAGAGAATACTAGACTAGGAGCTGATTCGAGCGAGGATGCTTATCGACTACTAGCTCTTACTGCGACAGCGACAGGTGGTTTAGTTAAAGATTCTGAGTATAAAGACGTAAGGAGTGGGGGCTATCATCTATTCAATGATGTTCCGGTCACTACTCAAATAAATACTACAACCCCTGACGGTTTCAACATGCTATCTTCTAATGTAGTTCTAAGTAGATTGGATTACGTAGAGGTTGGATTAAACCTCTCTAGTAATCAGTCTGTCTCGACTGGTGTATCTAGTACTCTGAACCTAGATAGTGTTGATCATGACTACTACAGTAACTACAATTCGCTTGGGTTCCTTCCAAAAACAACCTCTATGTATACGGTTGAAGGGCTAATAACGCTACGGGATGTATTAGGGGAAGGTACTGTGAACGTTGATGTTTACTCGGGATCTACGCGTATTAAAAGACTAGTATCAGAGAGCGTAAACCTCGACAGTTCAAGGAACGCTGGTGTGAAGCTTAGTGGGTCTTTTAAAGCGGAAGCTGGTTCAGTAATTACACTGAAACTAACTCAGGACATAGCCGCATCACTGGAGCTTGATTCAGACAACAACACAGGTACATGGGTAGATTTCAGGCAACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d8dc13684e0aeae0b1ebba8361daf415dbbf17721619eb1d8a6c9477fd2d9f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Type III CRISPR-Cas systems can provide redundancy to counteract viral escape from type I systems Silas,S., Lucas-Elio,P., Jackson,S.A., Aroca-Crevillen,A., Hansen,L.L., Fineran,P.C., Fire,A.Z. and Sanchez-Amat,A. 2017 28826484 GenBank