Protein

View in Explore
Genbank accession
QOI66209.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAYTPTKWNNDDVITAEKLNKLEQGVKNEQVGPAGPAGAVGPKGDKGDPGAQGPAGPSYTLPAANKTTLGGVKQMALIADLSTETATDLKNKINAILAEMKKQGIMANS
Physico‐chemical
properties
protein length:109 AA
molecular weight: 11205,61220 Da
isoelectric point:7,90855
aromaticity:0,02752
hydropathy:-0,48165

Domains

Domains [InterPro]
IPR022741
RBD
55–107
IPR022741
G3DSA:6.10.140.1630
RBD
55–109
G3DSA:6.10.140.1630
G3DSA:6.10.140.1630
RBD
58–109
G3DSA:6.10.140.1630
QOI66209.1
1 109
Architecture
RBD
RBD 55-109
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Atrivirus PS6
[NCBI] 		3426492 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66209.1 [NCBI]
Genbank nucleotide accession
MT980839.1 [NCBI]
CDS location
range 5474 -> 5803
strand +
CDS
ATGGCATATACACCAACTAAATGGAATAATGATGACGTTATTACAGCAGAGAAACTGAATAAGTTAGAGCAGGGCGTGAAGAATGAGCAGGTTGGACCAGCAGGACCAGCAGGAGCAGTAGGACCGAAAGGAGACAAGGGAGATCCGGGCGCACAGGGACCTGCGGGACCAAGTTACACTCTTCCAGCGGCGAATAAAACAACGCTTGGCGGCGTGAAACAGATGGCTTTGATTGCAGATTTGTCAACAGAAACAGCGACTGACCTGAAAAATAAAATCAATGCAATTCTCGCAGAGATGAAAAAACAAGGAATTATGGCGAATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7387206590e116fded59a27d0b565531efe87b10815de7dc20c631d2cc9f823e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8082
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temperate bacteriophages infecting mucin-degrading bacterium Ruminococcus gnavus from the human gut Khokhlova,E.V., Shkoporov,A.N., Draper,L.A., Kingston,A.R., Forde,A., Ross,R.P. and Hill,C. 2023-03-30 — GenBank