Protein

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Genbank accession
AYJ76492.1 [GenBank]
Protein name
putative preneck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTKPELKRFEQFGEIMVQLYERYLPTAFDESLTLLEKMNKIIHYLNEIGKVTNELIEEWNKVMEWILNDGLEDLVKETLERWYEEGKFADLVIQVIDELKQFGVSVKTYGAKGDGVTDDTKAFEKAIESGFPVYVPYGIFMVSRGIKLPDNTVLTGAGKRNAVIKFMDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRAGRNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENVWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISVNGHMSVEDVRSYNFRHIGHHAATDPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSRGGDAVNISNVTLNNSGRYGVSIGSGIENVSITNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTVARVAGTDYNDGLTLFNGAFRASTTSSGKIHSEGFIMGSTSXCEASVSKSGVLTSSSSKTSSERSLIAGSSTSEAKGTYNTILGSLGAVADEQFAALISASQSKASGNHNLILSSYGINTTGSYKVNGGFEKINWELDSLNGRIKARDTVTGGNTWSDFAEYFESLDGQVIETGYLVTLEKGKIRKAEKGEKIIGVISETAGFVLGESSFEWQGAVLKNEFGGIVYEEVTTEDGVKFKRPLPNPDFDPNKNYIPRSQRREWHVVGLLGQIAVRIDETVKQGRGIDAVGGVATDGDNFIVKEITTPYTKEKGYGVAIVLVK
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92060,67600 Da
isoelectric point:5,22273
aromaticity:0,08206
hydropathy:-0,25428

Domains

Domains [InterPro]
IPR012334
STR
84–551
IPR012334 G3DSA:2.160.10.20 G3DSA:2.40.300.10
IPR011050
STR
103–422
IPR011050 IPR006626 IPR006626 G3DSA:2.160.10.20:FF:000001 G3DSA:4.10.80.40
IPR024535
ENZ
105–333
IPR024535 DC_1692 IPR021865
IPR006626
Unmapped
224–246
IPR006626 IPR006626 IPR006626 IPR006626
AYJ76492.1
1 854
Architecture
STR
RBD
STR
RBD
STR 84-551 | RBD 552-579 | STR 580-631 | RBD 632-854
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYJ76492.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,9898
Central domain 121 658 539 0,9559
C-terminal 659 854 195 0,8768
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-658
C-terminal
659-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage BSP2
[NCBI] 		2301657 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYJ76492.1 [NCBI]
Genbank nucleotide accession
MH707426 [NCBI]
CDS location
range 11220 -> 13784
strand +
CDS
ATGTCAACTAAACCCGAATTGAAACGGTTTGAGCAGTTTGGAGAAATTATGGTTCAGCTATATGAACGTTATCTACCGACTGCCTTTGATGAAAGTTTAACATTATTGGAGAAAATGAACAAGATCATACATTACCTAAATGAGATTGGTAAAGTAACAAATGAGCTAATCGAAGAATGGAACAAGGTAATGGAATGGATTCTTAACGACGGGTTAGAAGACTTGGTGAAAGAGACGCTTGAGAGATGGTATGAAGAAGGCAAATTCGCTGACCTCGTTATCCAAGTCATCGACGAGTTGAAACAGTTTGGTGTTAGCGTTAAGACCTATGGAGCAAAGGGAGACGGTGTCACTGATGATACAAAAGCCTTTGAAAAGGCTATAGAATCGGGTTTCCCTGTATATGTGCCATATGGAATATTCATGGTTTCACGTGGAATTAAGCTACCTGATAACACCGTGTTAACAGGAGCAGGGAAGCGCAATGCTGTCATCAAATTTATGGATAGTGTTGGACGTGGAGAAAGCCTAATGTACAACGAAAACGTAACAACTGGAAATGAAAATATTTTCTTATCTTCTTTCACCCTTGACGGTAACAATAAGCGTTTAGGACAAGGCATCTCTGGTATTGGCGGTTCACGTGAAAGTAACCTTTCCATCCGAGCAGGTCGTAATGTTTATATCCGTGATATTGAAGCTGTTGACTGTACATTACATGGAATCGACATCACATGCGGTGGATTAGATTACCCTTACTTGGGCGACGGTACAACCGCTCCAAATCCATCAGAAAACGTTTGGATTGAAAATTGTGAGGCGACTGGTTTCGGTGATGATGGTATCACAACTCACCACAGTCAATACATCAATATCTTGAATTGTTACTCACATGACCCACGTTTAACAGCTAACTGTAACGGGTTTGAGATTGATGACGGTTCACGTCACGTGGTGTTAAGTAATAACCGTTCTAAAGGCTGTTACGGTGGTATCGAGATTAAAGCTCATGGAGACGCTCCGGCGGCTTATAACATCTCTGTTAACGGACATATGTCTGTAGAAGACGTTCGGTCATATAACTTCCGGCACATAGGACACCATGCGGCTACTGACCCGCAGTCCGTATCAGCTAAAAACATTGTTGCTTCGAATCTTGTATCAATTAGACCGAACAACAAACGTGGTTTCCAAGACAATGCTACGCCGAGGGTTCTAGCTGTATCGGCATACTACGGGGTTGTAATCAACGGTTTAACAGGGTACACAGATGACCCGAATTTATTAACTGAGACCGTTGTATCTGTTCAATTTAGGGCAAGAAACTGTTCCCTTAATGGTGTTGTTCTCACTGGATTCTCTAACTCTGAGAATGGAATCTATGTCATTGGCGGTAGCCGTGGTGGAGACGCCGTTAATATCAGTAACGTTACCCTTAATAACTCAGGTCGATATGGGGTATCAATCGGCTCAGGAATTGAAAACGTATCTATTACCAATATTAGCGGTATCGGTGACGGTATTAACTCTCCTGTAGCGCTCGTATCAACGATTAACAGTAACCCTGAGATTAGCGGATTAAGCAGTATTGGATACCCTACGGTTGCTAGGGTTGCCGGGACAGACTATAACGATGGTTTAACGCTCTTCAATGGTGCTTTCCGTGCTTCCACAACATCTAGCGGCAAGATTCACAGTGAGGGATTCATCATGGGTTCAACCTCGNGGTGTGAAGCGTCTGTTTCAAAATCAGGTGTTCTAACGTCATCAAGCTCGAAGACTAGTTCTGAACGTTCTCTCATAGCCGGTAGCTCAACATCAGAAGCCAAGGGGACATATAACACGATTTTAGGTTCACTAGGTGCGGTTGCTGATGAACAGTTTGCGGCTTTGATTTCTGCGTCTCAGTCAAAGGCATCAGGAAATCACAATTTAATTCTATCAAGTTATGGAATTAATACAACAGGATCATACAAAGTTAACGGTGGATTCGAAAAGATCAACTGGGAGCTAGATTCCTTAAACGGTAGAATTAAAGCCCGTGACACTGTAACAGGTGGTAATACATGGAGTGACTTCGCCGAGTATTTTGAGAGCTTAGACGGTCAAGTCATTGAAACAGGGTATCTGGTTACTCTTGAAAAAGGTAAAATCCGTAAAGCTGAAAAAGGTGAAAAGATCATCGGTGTTATCAGTGAAACAGCAGGATTTGTCCTTGGTGAATCATCATTTGAATGGCAGGGAGCTGTTCTTAAAAACGAGTTTGGCGGCATCGTTTATGAGGAAGTCACAACAGAAGACGGCGTAAAATTCAAGCGTCCGCTTCCAAACCCTGACTTTGATCCTAATAAGAATTATATCCCACGTAGTCAACGTAGAGAATGGCATGTTGTTGGTTTACTGGGACAGATCGCTGTTAGAATCGACGAAACAGTTAAACAAGGTCGTGGTATTGATGCTGTTGGCGGTGTTGCTACAGACGGCGACAACTTTATTGTGAAAGAAATAACTACCCCGTATACAAAGGAAAAAGGATACGGTGTGGCGATCGTGTTAGTTAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f2c5327c3b8b4dcec24b0fe68d1c72a4e92e037d13654fa2446fe92a0ebb8f4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Bacillus phage BSP2 Ghosh,K. and Kim,K.-P. 2018-12-01 — GenBank