Protein

View in Explore
Genbank accession
XAV38506.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLAKIQFLRSTVAGKTPTTSQLADGELAINMADYAIYTKNGSSIVQLAGKGIPETNTKKLTVNGPSALNDTVTVAEGKTITFTNADLSGGMVRHITGKNALNDGWYIGSGGESNKGFLEIGTIDDGDEEIRFVSRGSGDTVRRTLKLIDSGGNTRVPGNIYIDEAMGGGGSAFISKNKAYFGAGGADIYMRNTAGGATNQLTITDGGELLFQAKPVYWDGRKPTLTELGIGRVENARQLEQDNFPVTTGNETRWIKVALLKDPGSGQSRLQLMVTNGGNYGSTRSSIDFIDCSARSIPSTLTSGNVRSYLQVRRLGDTAIDYTNQMRYSLVRTSEGLELWFTQRAFIGGVKVALLSIAGGAATEYYLPTGYTISSTAPEGLVESVVIRIYDEMNKPNLDDGTDGILSVAKGGTGASTASAARTNLGLGTAATRDVGEGDGNVLERGAFGLGGTVGAGNIAKGSLAETVKYLNTYGTCFFRVEDNIATIPQYSPSIYVKTGSNQLILSANHRNGVISVITTDKVDGTNLTVSQVYTTLNKPSPADVNAVARTGDTMSGDLLISKESPGLFLNATNDTGNSVIWFRNKGVETGAVWAIPNTESSGEVRIRARTTAGVTGGEFKFKSDGTFTSPGNINITSGAFNGKSVNTQYANFNNTSSTTTEQTVSISGSQHTPLLLNRPTNSNLSIGFKLSGMNMKRLGIDVNGDIRYGEAENQTQNAWLLSSDTINRWTVNFGRDINVAGVVNSTGGFTGPVTAYDLTGVTQDLDALTLNYTEPGHVKVYSCRSMGGGDNITNKPSGVGGNFIVIVECLRKVSGTDYTNRQVLRASDNSRSWERWLTVSGTTKAWTPWRMNVVSGNDDDVSFKSVTTTTGNLNSGNDLIVANNARVGGNLGLGGASSTKYADKGVVIGKGSALLETTDGRVIIGSSGGGNAVELRPGGPTQTNNRIKVTATSGSGGDTAIEYEQGAKIRSNNGGALIISAKAGQSIYLRPQGDASSTNETRIDANGSITINGNINANGTLTCTGGAVNGDLTVSGKVDITGNQLKTTSLWVTGNSALNGNLEVGGNVVSNTGIGSFVGAVDVKAPAVDNGTTHLWFRHSNGGERGVIYMPGNNNTMMGLRAGGSEWQLDGPTGQMIGPGARWRIHADGNLQGDVYGGYITNYINDRFNQCAQWVRTGAQQDFGPIGRPAPGKTVPGGWVLVGLNGNSNEANQNMQLIGGRLQVWKPGVQWVDSAT
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 130188,12150 Da
isoelectric point:7,06431
aromaticity:0,06699
hydropathy:-0,30089

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAV38506.1
1 1239
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,0802
Central domain 365 563 200 0,1926
C-terminal 564 1239 675 0,6341
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-563
C-terminal
564-1239

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KP1
[NCBI] 		3149139 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae subsp. pneumoniae
[NCBI] 		72407 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Klebsiella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAV38506.1 [NCBI]
Genbank nucleotide accession
PP782000.1 [NCBI]
CDS location
range 166652 -> 170371
strand +
CDS
ATGGCTGATTTAGCAAAAATTCAATTCCTACGTAGCACAGTTGCGGGGAAAACACCTACTACAAGTCAGCTTGCAGATGGTGAACTGGCGATCAATATGGCTGATTATGCCATTTACACGAAAAATGGTTCTTCGATCGTTCAGTTAGCGGGTAAAGGTATCCCAGAAACAAATACCAAAAAATTAACAGTAAATGGGCCTAGTGCTCTTAATGATACCGTTACCGTAGCGGAAGGTAAAACTATTACTTTCACCAACGCGGATTTGAGCGGGGGTATGGTTCGTCATATCACTGGTAAAAACGCGCTTAATGATGGTTGGTACATCGGTTCTGGTGGTGAGAGCAATAAAGGGTTTTTAGAAATCGGTACAATTGATGACGGTGATGAAGAGATCCGTTTCGTTTCCCGTGGTTCTGGTGATACTGTTCGTCGTACTCTGAAACTTATTGATTCCGGTGGTAACACTCGCGTACCAGGTAACATCTATATTGATGAAGCTATGGGCGGTGGTGGTTCTGCTTTTATTTCAAAAAACAAAGCATATTTCGGTGCTGGCGGTGCTGATATCTATATGCGTAACACTGCTGGCGGTGCAACAAATCAGTTAACGATCACTGATGGCGGTGAATTGCTGTTTCAAGCAAAACCTGTATACTGGGACGGTCGTAAACCGACTTTAACCGAATTGGGGATCGGTCGGGTTGAAAACGCGCGTCAACTTGAGCAAGATAATTTCCCTGTAACTACAGGCAACGAAACTCGTTGGATTAAAGTTGCTCTGTTAAAAGATCCTGGCTCAGGTCAGAGTCGCTTGCAACTGATGGTGACTAACGGTGGTAACTATGGCAGTACGCGCAGTTCTATTGACTTTATCGATTGTAGCGCTCGAAGCATTCCATCGACATTAACAAGCGGTAACGTTCGTTCTTACCTGCAAGTTCGACGTTTAGGAGATACTGCAATTGATTATACTAACCAGATGCGTTATAGCCTGGTTCGTACCTCAGAAGGGTTAGAACTGTGGTTTACTCAACGCGCATTCATTGGTGGTGTTAAAGTTGCTCTGCTGTCTATCGCTGGCGGTGCTGCTACTGAATATTATCTGCCTACTGGTTACACAATCTCTTCAACTGCTCCGGAAGGGTTAGTTGAGAGTGTGGTTATTCGTATCTATGACGAAATGAACAAGCCTAACCTTGACGATGGTACTGATGGTATTCTGTCTGTTGCTAAAGGTGGTACAGGCGCAAGTACAGCCTCTGCTGCTCGCACAAACTTAGGTTTGGGTACGGCTGCAACCCGTGATGTTGGCGAAGGCGATGGTAATGTTCTCGAAAGAGGTGCATTTGGTCTTGGTGGTACGGTAGGCGCTGGAAATATTGCAAAGGGTTCTTTAGCAGAGACCGTTAAGTATCTTAATACATACGGAACATGCTTCTTCAGGGTAGAAGATAACATTGCTACAATACCACAGTATTCTCCTAGCATTTATGTTAAAACCGGAAGCAACCAGTTAATTCTTTCAGCTAACCACAGAAACGGTGTTATTAGTGTCATCACTACGGATAAAGTTGATGGTACTAATTTAACAGTATCTCAAGTATATACTACGTTGAATAAGCCATCACCGGCTGATGTTAATGCTGTTGCTCGTACTGGTGATACAATGTCTGGTGATTTGCTTATCAGTAAAGAGTCACCTGGGTTATTTTTGAATGCCACTAATGATACCGGAAACTCTGTAATTTGGTTTAGAAACAAAGGAGTTGAGACAGGTGCTGTATGGGCAATACCTAACACCGAGTCTTCGGGTGAGGTTCGAATTCGTGCTAGAACGACTGCTGGGGTCACAGGCGGCGAGTTCAAATTTAAATCTGACGGTACATTTACATCACCTGGTAATATCAATATTACTAGCGGCGCTTTCAACGGTAAAAGTGTCAATACTCAGTATGCGAACTTTAATAACACAAGTTCAACCACAACCGAACAAACCGTTTCTATTAGTGGTTCGCAGCACACTCCGCTGTTACTGAATAGACCGACTAACTCGAACTTGTCTATCGGGTTCAAACTTTCCGGAATGAACATGAAACGTTTGGGTATTGATGTAAACGGTGATATTCGTTACGGTGAAGCAGAAAACCAGACACAAAACGCATGGCTGTTGTCTTCGGATACGATAAACAGATGGACTGTTAACTTCGGTCGTGATATTAACGTTGCTGGTGTGGTTAATTCAACTGGTGGATTTACTGGCCCTGTTACTGCATATGATTTGACTGGGGTAACTCAGGATCTTGACGCTTTAACGTTGAATTATACCGAACCAGGTCATGTTAAAGTTTATTCGTGCCGTAGCATGGGTGGCGGTGATAACATCACCAATAAACCTTCTGGCGTCGGTGGTAACTTTATTGTTATCGTTGAATGTCTCCGTAAAGTGAGCGGTACTGATTACACTAACCGTCAAGTATTACGCGCATCGGACAATAGCCGCAGTTGGGAACGTTGGTTAACTGTTAGCGGTACTACTAAAGCATGGACACCGTGGAGAATGAACGTTGTTAGCGGAAACGATGATGATGTATCATTTAAATCTGTTACCACGACTACAGGAAACCTGAACAGCGGAAATGATCTGATTGTTGCTAACAACGCTCGCGTAGGTGGTAACTTAGGGTTAGGTGGTGCTTCTTCCACGAAATACGCTGATAAAGGTGTTGTGATTGGCAAAGGTAGTGCTCTGTTAGAAACTACTGATGGTCGTGTGATTATTGGTAGTTCTGGTGGTGGTAATGCTGTTGAATTGCGTCCTGGTGGCCCAACTCAAACCAACAACAGGATCAAAGTAACTGCTACCTCTGGAAGTGGTGGTGATACTGCGATCGAGTATGAACAAGGGGCGAAAATTCGTTCTAATAACGGCGGCGCGTTGATTATTTCTGCTAAAGCAGGTCAATCAATCTATCTACGACCGCAAGGTGATGCATCCAGCACAAACGAAACCCGTATTGATGCAAACGGTAGTATCACGATTAACGGCAATATTAACGCCAACGGTACATTAACTTGTACTGGTGGTGCTGTTAACGGAGACTTGACTGTATCAGGAAAAGTAGATATCACTGGAAACCAGTTAAAAACCACATCGCTCTGGGTTACTGGAAATTCGGCACTTAACGGTAATTTAGAAGTAGGCGGTAATGTTGTTAGTAATACTGGTATTGGTAGTTTTGTTGGTGCTGTAGATGTTAAGGCCCCTGCCGTAGATAATGGTACAACGCACCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGTGTGATTTACATGCCAGGTAACAATAATACCATGATGGGATTAAGAGCTGGCGGTAGTGAGTGGCAATTGGATGGTCCGACAGGTCAAATGATAGGCCCAGGTGCTCGTTGGCGTATTCATGCAGATGGTAACCTACAGGGTGATGTTTACGGTGGTTATATCACTAACTATATCAACGATAGGTTTAACCAATGTGCACAGTGGGTTCGTACTGGTGCTCAACAAGACTTTGGTCCAATTGGTCGTCCAGCACCTGGTAAAACTGTTCCTGGTGGTTGGGTGCTTGTTGGTCTTAACGGTAACAGCAACGAAGCTAACCAGAACATGCAACTTATCGGCGGACGGTTACAAGTATGGAAACCGGGCGTTCAATGGGTTGATTCTGCTACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1440470c11a82d9ce22187e9ba9b49112e00a027c4c4e42de0c30a66cf9a251e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of a new Klebsiella phage vB_KpnM_KP1 Simon-Olea,B., Gonzalez-Villalobos,E., Balcazar,J.L. and Molina-Lopez,J. 2025-06 — GenBank