Protein

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Genbank accession
QXO06356.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MSDFRYQGYNFNLTSFREFVQEFNIMDNQRASADALNKSVNKLKREVNQLIGQFKILTSKESIRWDASIIYEAGEIVSYITEDNPDVETIKNSYYLALPSDIENQGYYPDANSDMWKKVTLNELYPWLDVDNYPTKTDNDKDWPIVDDYDVINLKYLKWSLEQFKDFLDGYLAGIYIKQDNKIDLEVSKPTHVTTKKYVDVLIDEVKQSVANIDDLLTDYVFVDSKSKQLQTRKSKKEAWLTTEAGLLPGLNLISTIGSTTQQFKAMYAQDFIGTALKAKYADLAEVYETDKEFEVGAVLGINENSEIEYFDIYKHNRPLGVVSDKPGFILNKDCKGVLIALKGQTPVIVKGSVKAGDELYAEYDGYACVNPSKKEEKYFIGIALESKESELVGLVNTKV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 45594,89960 Da
isoelectric point:4,76705
aromaticity:0,11500
hydropathy:-0,42450

Domains

Domains [InterPro]
DC_1011
STR
1–280
DC_1011 G3DSA:2.40.300.10
Coil
Unmapped
26–60
Coil G3DSA:2.40.300.10
QXO06356.1
1 400
Architecture
STR
RBD
STR 1-280 | RBD 281-385 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-14
[NCBI] 		2780166 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06356.1 [NCBI]
Genbank nucleotide accession
MW074126.1 [NCBI]
CDS location
range 28081 -> 29283
strand -
CDS
ATGTCTGATTTTAGATACCAAGGCTATAATTTTAACTTAACTAGTTTTAGAGAGTTCGTTCAAGAATTCAATATTATGGATAACCAAAGAGCTAGCGCAGACGCACTAAACAAGTCGGTTAATAAACTCAAAAGAGAGGTTAATCAATTAATCGGTCAATTTAAAATATTAACTTCAAAAGAATCTATCAGATGGGATGCTAGCATAATTTATGAAGCAGGTGAAATAGTTTCTTATATAACAGAAGATAATCCAGATGTGGAAACCATTAAAAATTCATATTATTTAGCATTGCCTAGTGATATCGAAAATCAAGGGTATTATCCAGATGCTAACTCTGATATGTGGAAAAAAGTCACTTTAAATGAATTATATCCTTGGTTAGATGTAGATAATTACCCTACTAAAACTGACAATGATAAAGATTGGCCTATTGTCGATGATTACGATGTTATTAACTTAAAGTATCTTAAATGGTCTTTAGAACAATTTAAAGATTTCTTAGATGGTTATCTCGCAGGCATCTATATTAAACAAGACAATAAAATAGATTTAGAAGTATCTAAACCTACTCACGTAACAACTAAAAAATATGTCGATGTTTTAATAGATGAAGTGAAACAAAGTGTTGCTAATATAGATGATTTGTTAACGGATTATGTATTTGTTGATTCTAAATCTAAACAATTACAAACTCGTAAAAGTAAAAAAGAAGCTTGGTTAACCACAGAAGCCGGATTATTACCAGGATTAAACTTAATATCTACAATTGGCTCAACAACGCAACAATTTAAAGCTATGTATGCTCAAGATTTTATAGGAACTGCTTTAAAAGCAAAATACGCTGACTTAGCTGAGGTCTACGAAACCGATAAAGAGTTTGAAGTTGGAGCTGTTCTAGGTATTAATGAAAATTCAGAAATTGAATATTTCGACATCTATAAACATAATAGACCTTTAGGTGTAGTTTCAGATAAACCAGGATTTATTCTTAATAAAGATTGTAAAGGTGTGTTAATAGCTTTAAAGGGTCAGACACCAGTAATTGTTAAAGGTTCTGTAAAAGCCGGTGATGAATTATACGCTGAGTATGACGGTTATGCTTGTGTAAACCCAAGCAAAAAAGAAGAAAAATATTTTATAGGTATAGCTTTAGAATCTAAAGAATCTGAACTAGTTGGCTTAGTAAACACTAAAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53727a89e39b07637c0fffd667effb9931b66f7bad94965bc7e00a735714fff0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7065
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank