Protein

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Genbank accession
XLM30057.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNKAYTWNEKTGLDFCRELPQWNLLTRSNLRTLVGDAVEEPEKFDPSYYFKLNSLGSAVKTGQFPSSWHRPYSQGIRIYNPKNATGKWGWTYLTHWEKLPVKPNLTQGNKLGVSIRLTNFGRKPLDFHLKLLYGNSVASVGTYTVEPWQYIFVSELVTLQNTETVEKLGLTVELDSTGQEEQIGLFFPKIEMDKVTPYAVTEAEHIYFESKSSGDSRPVYTGYSETDSDDFKDYIWGGQLNDESYELFGGDTKQNAVWCYCRPLNQRVLIGIDSDTYTNASGRTVNFHVLNGSKSVFDMTGNTLYPEQFQDERQAFDSVGNDWATIQEPLYVVDQNTAIDPVAGEMANVVIEGYHYPQASGGYRIDEIPRSAIGNVGYSLGSYYAYERPFKEIDLMRSRDGVVATKIFDRANYSSMNDWMTTYGLPNGLIMRPWRVRMIDEETDLTRIKGISIGWNVSLFQKFLATDHMSEDWFRGYDNKRTKAVPDRVLFINDEQKRAWLYKYNPTKSVWKRSVEYILPAVATAFLENWSIVPKDGAMNGHIIFTDKTNVEMIQNIRPNWLDYDEFTPKVQYDEVKYNPQMFTNLYNTRYQWWGIKDENPQNQSYGPCVPYEMDFMTGLCKLERIYE
Physico‐chemical
properties
protein length:628 AA
molecular weight: 72660,69250 Da
isoelectric point:5,19710
aromaticity:0,13854
hydropathy:-0,56927

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLM30057.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,1311
Central domain 201 488 289 0,9591
C-terminal 489 628 139 0,2167
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-488
C-terminal
489-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage vL_5A
[NCBI] 		3385191 Viruses >
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM30057.1 [NCBI]
Genbank nucleotide accession
PQ594016 [NCBI]
CDS location
range 1849 -> 3735
strand +
CDS
TTGAATAAGGCATATACTTGGAACGAAAAAACAGGGCTAGACTTTTGTAGAGAGTTGCCACAATGGAACTTATTGACACGTTCAAACCTTAGAACATTAGTAGGGGACGCTGTGGAAGAACCTGAAAAATTTGACCCTAGTTATTATTTTAAATTGAACTCTTTAGGTAGTGCTGTTAAAACTGGACAATTCCCCTCTAGTTGGCACAGACCTTATAGTCAAGGCATTAGAATTTACAACCCTAAAAACGCCACAGGCAAATGGGGTTGGACTTATTTAACGCATTGGGAAAAGTTACCAGTTAAACCTAATCTCACACAAGGCAATAAATTAGGAGTGTCAATTCGTTTAACTAATTTTGGAAGAAAACCCTTAGACTTTCATTTAAAACTCTTATACGGCAATTCTGTGGCTTCTGTTGGTACTTATACAGTTGAACCGTGGCAATATATTTTTGTTAGTGAATTAGTTACGCTACAAAATACAGAAACGGTTGAAAAGTTAGGTTTGACCGTTGAACTAGATAGCACAGGACAAGAAGAACAAATCGGCTTGTTTTTCCCTAAAATCGAAATGGATAAGGTAACGCCTTACGCAGTAACAGAAGCTGAACATATCTATTTTGAAAGTAAATCGTCAGGAGATTCAAGACCAGTTTATACAGGCTATTCTGAAACAGATAGTGACGATTTTAAAGATTACATATGGGGCGGACAGTTGAACGATGAAAGTTATGAGCTATTCGGCGGAGATACAAAACAGAATGCGGTTTGGTGCTATTGTCGTCCTCTTAATCAACGTGTATTGATTGGAATTGATTCTGATACGTATACAAATGCAAGTGGTAGAACAGTTAATTTTCACGTTTTAAACGGTTCTAAGAGCGTGTTTGACATGACAGGGAACACTTTATACCCAGAGCAATTTCAAGACGAAAGACAAGCGTTTGACAGCGTTGGGAATGATTGGGCAACAATACAAGAACCGTTGTATGTAGTAGACCAAAATACAGCAATTGACCCAGTAGCAGGAGAAATGGCAAACGTGGTAATAGAGGGTTACCACTATCCTCAAGCAAGTGGAGGTTATAGGATTGATGAAATTCCACGTTCAGCAATTGGAAATGTTGGTTATTCTTTAGGTTCTTACTATGCCTATGAACGTCCGTTCAAAGAGATTGACCTTATGCGTTCAAGAGATGGAGTTGTAGCCACTAAAATTTTTGATAGAGCAAATTATAGCAGTATGAATGACTGGATGACTACATACGGACTACCTAACGGATTAATCATGCGGCCTTGGAGGGTTAGAATGATAGACGAAGAAACTGACTTGACTAGAATTAAGGGCATTTCAATCGGTTGGAATGTTTCTCTGTTCCAAAAATTTCTAGCAACAGACCACATGAGTGAAGACTGGTTCAGAGGTTATGACAATAAACGAACTAAAGCAGTACCCGACCGTGTTCTGTTCATTAATGACGAACAAAAAAGAGCATGGCTTTATAAGTACAACCCTACCAAGTCAGTATGGAAACGTTCGGTAGAATATATTTTACCAGCAGTCGCCACAGCTTTCTTAGAAAATTGGTCTATCGTACCAAAGGACGGTGCAATGAACGGTCATATTATTTTCACAGACAAAACTAATGTTGAAATGATTCAAAACATTAGACCTAACTGGTTAGACTATGACGAGTTTACACCTAAAGTGCAGTACGATGAAGTCAAGTACAACCCTCAAATGTTTACAAACTTGTACAATACACGCTATCAATGGTGGGGAATTAAAGACGAAAACCCACAAAATCAGTCTTATGGTCCTTGTGTTCCGTATGAAATGGACTTTATGACAGGACTATGTAAATTAGAAAGGATATATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e38bb395776464e7f9f544ad22101c4e99e1325e3bcea48bd564bc0f7f03292
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3364
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50