Protein

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Genbank accession
XOD42006.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDPFKIVQFDIRGTRPENKIIGEKMLIKDKTCPWLIPNGSPFFAEPGLFTLYDERGAEMTLNRDYWLEEAFIPFCEISGRNVCCFIRLSESIRQNNAFVTGDYQTIGAWFVPRNNLDEWLEKMREGKIPIEWEKVFGVPPTLPPEYHLHKADTEIGDWYELTFFLDTMANIYRSRDPELEDQSEVVINEAFTRLRSFRDAQMRRLVEHDKNYNAPHLQTKTNLNLGNLDNFATATPEQDKAGTADNLFSTTLGVKELVRGYTPDTSASMRSGIIAISRFGGTDYIPPGISGSFEGLGGVTPDCAAVLELNDNLVFIRAHYDGRTEGLYYTVVRNHLSLNPDVSFTGYKYQPPSLTAIGFVPNRVFTGSGRTIIMVTRDGTNQVYAALTNGTLDPSAHVFVKCNIDLAIQDLGTSVRLTEWSQIHTLGNWVYLFVTAITEGQWGGWGHSRTRAYRAPLSAIKNGQPLTFSRVKVSLTNVPGALQSNVDYIEFTPAPPDGEFSTYGPITFAPYKAKKGVKGSQRRPLMFFSESSDIGPQYCSMHYFGMMFFTGNINGVDRVTGMYIDCSYDFNPETATFVVVKQPPAQTVDLSKIISVNSTASVHYAGISDVFFNISDHSSHLLLENKVIVGMSRLGLRVSFPGLFSRLQFNKDPSVTASGMLRDYMHADNANFSGMGVWETPSYPIKNGGRISAVGYELTGEYFWADSTVDHNRSFFYRKVSGEYAARPGITNSNYPTLLTRPISAEVYENRLDRNTSLISVTGSAAFLTAEGIEMGNSCFSVMGMNHFDDLASGVESDTTCPREFTFKAPKGNGIVLSCPRTFSRVMDSGDQTFTLKGESHWGVKRNVMDKLIQLIPATLREKWAVELIVINPVSGKGFSRMNYVLALVHTRDIEGGQYVVRSKLLACTPVIGNPVSGVYPIDDLTILDQTAFITTVNNSGAGNEWSDTEADVVACPQVSLYVDEATNTLSGRISSLYNVRSEALGFNKAVLTFSLNKSTHKFSSFTPFNNGEGMSAAWCVQNHAIPNAGLITQQQGYVFEDTGGAGYVGKIGTNTYLIGSCYPEVGWTIFFQEEVEMMINGTVYKMPGGSIDLRNVSSNPRNKTFYIYATVEESEGRYIVSDVKLRRSSELLHVATAVTNTNQIASITRQKVFTIGEFLLSYTRTGGIIPVSSGLPQDEGTFSFLKASELLP
Physico‐chemical
properties
protein length:1193 AA
molecular weight: 132269,91850 Da
isoelectric point:5,67568
aromaticity:0,10981
hydropathy:-0,19539

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD42006.1
1 1193
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,9737
Central domain 269 505 238 0,6183
C-terminal 506 1193 687 0,3348
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-505
C-terminal
506-1193

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS8_1
[NCBI] 		3390396 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD42006.1 [NCBI]
Genbank nucleotide accession
PQ287644 [NCBI]
CDS location
range 110320 -> 113901
strand +
CDS
ATGGATCCGTTTAAAATCGTTCAATTTGATATTCGTGGAACGCGCCCGGAGAATAAGATCATCGGGGAGAAAATGCTGATCAAGGATAAGACCTGTCCTTGGTTGATCCCGAATGGGTCCCCGTTCTTTGCTGAACCTGGCCTGTTCACGTTGTATGACGAACGGGGTGCTGAGATGACCCTCAACCGGGATTACTGGTTGGAGGAAGCCTTTATCCCGTTCTGTGAGATCAGCGGTCGGAATGTTTGTTGTTTCATTCGGTTAAGTGAGAGTATTCGTCAGAACAACGCATTCGTTACCGGAGACTACCAAACCATTGGGGCGTGGTTCGTACCGCGTAATAACCTGGATGAATGGCTGGAAAAAATGCGGGAAGGGAAGATTCCCATTGAGTGGGAGAAGGTCTTCGGTGTTCCACCCACCCTACCGCCCGAATACCATTTGCATAAAGCTGATACCGAAATTGGTGATTGGTATGAGCTGACGTTCTTCCTGGATACCATGGCGAACATTTACCGGAGCCGAGATCCAGAGTTGGAGGATCAATCGGAAGTTGTGATCAATGAGGCGTTCACAAGGCTCAGGAGCTTCCGGGACGCCCAAATGCGTCGTCTCGTCGAACACGACAAGAATTACAACGCCCCTCACCTCCAAACGAAGACCAACCTTAACCTGGGCAATCTGGATAACTTTGCTACCGCTACTCCTGAACAGGATAAGGCTGGTACGGCTGATAACCTCTTTAGTACCACACTGGGGGTTAAGGAACTGGTCAGGGGGTATACGCCGGATACGTCGGCTTCCATGCGTTCAGGAATTATTGCCATTAGTCGGTTTGGGGGAACGGATTATATCCCTCCGGGTATTAGTGGTTCGTTTGAAGGTCTGGGGGGTGTTACCCCGGACTGTGCAGCGGTATTGGAACTGAATGATAACCTGGTCTTTATTCGGGCTCATTACGACGGACGGACGGAAGGGCTGTATTACACTGTGGTTCGGAATCACTTGAGCCTGAATCCCGACGTTTCCTTCACCGGGTATAAATACCAACCCCCGTCGTTAACGGCCATTGGCTTCGTACCTAACCGGGTCTTTACAGGGAGTGGTCGGACTATCATCATGGTAACCCGGGATGGGACGAACCAGGTGTACGCCGCGCTGACCAATGGTACATTGGATCCTTCCGCGCATGTGTTTGTCAAATGCAACATTGATTTGGCTATCCAAGATCTGGGGACGTCAGTTCGTCTAACGGAGTGGAGTCAAATACACACGTTGGGTAATTGGGTCTATTTGTTTGTGACAGCTATAACTGAAGGTCAATGGGGTGGTTGGGGACATAGTCGTACACGGGCCTACAGGGCACCTCTCAGCGCGATTAAGAATGGCCAGCCTCTTACCTTCAGTCGTGTTAAAGTCTCACTGACGAACGTCCCAGGGGCCTTACAGAGCAATGTTGACTACATTGAGTTCACCCCCGCTCCTCCAGACGGTGAATTCAGTACCTACGGCCCCATTACCTTTGCGCCTTATAAGGCTAAGAAAGGGGTTAAGGGATCCCAACGACGTCCCCTGATGTTCTTCTCTGAATCCAGTGACATAGGACCTCAATATTGTTCCATGCATTACTTCGGGATGATGTTCTTTACGGGGAACATCAATGGAGTGGATCGTGTGACCGGGATGTACATCGATTGCAGTTACGATTTCAACCCTGAAACAGCGACCTTCGTGGTGGTTAAACAACCCCCCGCACAAACCGTTGACCTGAGCAAGATCATTAGTGTAAACTCAACGGCCTCTGTGCATTATGCAGGTATCAGTGACGTCTTCTTCAACATCTCTGACCACTCCAGTCATCTCCTGTTGGAGAATAAGGTGATTGTCGGGATGTCACGTCTAGGGTTGAGGGTCTCCTTCCCGGGGTTGTTTAGTCGCTTGCAGTTCAACAAAGACCCGAGTGTAACTGCCAGTGGGATGTTGCGGGATTACATGCACGCGGACAATGCGAACTTCTCGGGGATGGGGGTGTGGGAAACGCCCAGTTACCCTATTAAGAACGGAGGGCGAATCAGTGCAGTGGGGTATGAACTTACCGGTGAATATTTCTGGGCAGACAGCACTGTGGATCATAACCGGTCGTTCTTCTACCGGAAGGTCAGCGGTGAATACGCTGCGCGTCCTGGGATTACCAACAGTAACTACCCCACCTTATTGACTCGACCGATCAGTGCGGAGGTGTACGAGAACCGGTTGGACCGTAATACTTCCCTGATCAGTGTGACCGGGAGTGCAGCGTTCCTGACCGCTGAAGGGATTGAAATGGGGAACAGTTGTTTCTCTGTAATGGGAATGAACCATTTCGACGACCTGGCCTCAGGGGTTGAATCCGATACCACATGCCCCAGAGAGTTTACCTTTAAAGCCCCTAAAGGAAATGGGATCGTGTTATCCTGCCCTAGGACCTTCAGTCGGGTAATGGACAGTGGGGATCAAACCTTTACTCTGAAGGGTGAAAGCCATTGGGGTGTTAAGCGTAACGTCATGGATAAACTGATCCAGTTGATCCCCGCTACCCTCAGGGAGAAATGGGCGGTCGAGCTGATAGTGATCAATCCTGTCAGTGGTAAAGGGTTCAGTCGGATGAACTACGTGCTGGCGTTGGTTCATACCCGGGACATCGAAGGGGGTCAGTATGTGGTCAGGAGTAAACTGTTGGCCTGTACACCGGTGATTGGTAATCCAGTCTCGGGGGTCTACCCGATTGATGACCTTACGATTCTTGATCAAACCGCGTTTATCACCACGGTGAACAACAGTGGGGCTGGGAATGAGTGGAGTGACACGGAAGCGGATGTTGTGGCGTGTCCTCAGGTGTCGCTTTATGTGGATGAGGCAACGAATACCCTCTCCGGGCGTATTTCGTCGTTGTACAACGTCCGAAGCGAAGCCTTGGGGTTCAACAAAGCCGTCCTGACCTTCAGTCTCAATAAATCTACCCACAAATTCTCCAGCTTTACACCCTTTAACAACGGGGAAGGAATGTCCGCGGCGTGGTGTGTGCAGAACCACGCCATTCCTAACGCCGGGTTAATTACCCAACAGCAAGGCTACGTCTTTGAGGACACTGGCGGTGCGGGGTATGTAGGGAAGATCGGAACGAACACGTATTTGATTGGTTCCTGTTACCCGGAAGTGGGTTGGACGATTTTCTTCCAAGAAGAAGTCGAGATGATGATCAACGGTACCGTGTACAAAATGCCCGGTGGGTCTATCGACTTGAGGAATGTGTCCTCGAATCCTCGTAACAAAACGTTCTACATCTATGCGACGGTTGAAGAGTCGGAAGGGCGGTATATTGTCTCCGATGTTAAACTACGGCGTTCCAGTGAGTTGCTGCATGTCGCAACCGCCGTGACGAACACCAACCAGATCGCCAGTATTACCCGGCAGAAAGTCTTTACCATCGGTGAGTTCCTATTAAGTTACACACGGACGGGAGGGATTATTCCGGTGAGTTCTGGTTTACCGCAGGATGAAGGTACGTTTAGCTTCTTGAAAGCCTCGGAACTTTTACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52c34a357bb0e416c20b3e1e5b543006a6fe83cbe389788b1ac39e1a670c5ff8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50