Protein

View in Explore
Genbank accession
UYD58651.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MFDQPFRATSGLDAAGEKVINVAIADKATLSDGVNVEFFHKYNTIYQYDPSRGYDARHAVIYERRIYFAKADIASPAGTFDPLKWTGLRVDPTWQYVNSVAGAMQLVSGQYITADNRFNNLIFNLPAAPIDGDTIVIKDVGGQPGVNDLVFSTIGAAIIEFNGKTYGNTFRGTVPFCEYVFVYKVAGNRWQLDTCASTEQSYFVAPSSQGFQLQSGMTTWRQTAQGQIRMILPKFANHGDVIRTHDIDGLNAINHSTLEVYPDSGHSINEAGVSKVESRTSGYGSFVFDEPSKTWEIWDGDQRTRIRVTKADTSVMPFEHILVTGDGTSASRTVTLTLPEKVAIGDRVQVTMDYMRRAQTCTIRVKPNSGEVIVGSKAQMQFQRRSEYPAINGWELVSSVSINADTDYVPYVELMYAELDPALVGVTGSKFGWMFGQVQPKVERVDATQRDRLGVAALAAQSEVDKNHEQNPNDETIVTPLTLSRKTATETRRGIARIATTGEVSQISTATYLDDVIVTPKKLNARTATETRRGLAEIATQGEANGSTDDTTIVTPKKLHNRVASETLTGILAIVKKSGTPGTARNLAGVGVYNRADHLRAVTPATLDEFVATETAKGVGYIATQLEVDGGSTDSNGPLLVTAERLAARRASESNHGLIEIATQAETNAGVDDTRAITPKKLNDRTAQEARTGIAAIATHAEVNIGTEGYKIVSPLKLKTRFDNMSRVEVDGAAGLTRSGTIWDKVSIGIVPATESQRGTLRVATQVEANGSTSDDTMITPKKLDGRKATRSLDGIIRIGTTTEVRAGTLSSVAVCPADLIYMIQTEPTWSGNESRRGSVKTATMESTFVGNNTAGSTQAYTSYANDGLAVSPRGLNYALQNFLPKMATAQNSLSLGGVVANDWIRRTVAQTVTGAMTFTAAMTTQAVTGTTSTFNLSFIESNRSDALTIGSANNIGVTGITFIAGNKGSNKWKLYAGNDSAVDGVGVGGIGFAPGVDGPVLHVTVAGDSWTKRNIVSRNGHLVLEDATSRITMGNLHFASVNTGIVDIGSSSRSMKLISANDNVKINNFDIIHAGNQAQKLDPIYLRRDGGNTQTGKVLAAMNGDVKYNTYRNDNRYISSRGNDFVFGNTDTTNGRVCLDSNKNPIVKIGNFEYEIYHKGNKPTAQDVGAVDITGSAANNLTIRDWIKIGNVKIVANNLLKTVEFIWEE
Physico‐chemical
properties
protein length:1210 AA
molecular weight: 130540,74610 Da
isoelectric point:6,66968
aromaticity:0,07107
hydropathy:-0,27413

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD58651.1
1 1210
Domain Start End Length (AA) Confidence
N-terminal 1 385 385 0,5873
Central domain 386 710 326 0,0826
C-terminal 711 1210 499 0,6220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-385
Central
386-710
C-terminal
711-1210

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM10-HWA
[NCBI] 		3101600 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD58651.1 [NCBI]
Genbank nucleotide accession
OP380599 [NCBI]
CDS location
range 38470 -> 42102
strand +
CDS
ATGTTTGATCAACCTTTCCGTGCTACCAGCGGCCTAGATGCTGCCGGTGAAAAAGTTATCAACGTTGCGATCGCGGACAAGGCCACCCTGTCCGACGGAGTTAACGTTGAATTCTTCCACAAATACAATACAATTTACCAGTACGATCCGTCCCGCGGGTACGACGCCCGTCATGCAGTAATATACGAACGTCGAATCTATTTCGCCAAAGCCGATATTGCATCACCTGCTGGCACATTCGATCCGCTTAAGTGGACAGGTTTGCGTGTTGACCCGACCTGGCAATATGTCAACTCGGTAGCTGGAGCAATGCAGCTTGTATCAGGACAATACATTACGGCCGACAATAGATTCAACAACTTGATTTTTAATCTTCCAGCGGCACCAATCGATGGTGATACCATTGTAATTAAAGACGTTGGCGGCCAACCAGGCGTTAACGACCTGGTATTCTCTACCATCGGGGCTGCCATTATCGAGTTCAATGGCAAAACATACGGCAATACATTCCGTGGTACCGTGCCATTCTGTGAATATGTTTTTGTTTACAAAGTAGCGGGCAATCGCTGGCAATTGGATACTTGTGCCTCGACTGAGCAAAGTTATTTCGTTGCACCATCTTCACAAGGTTTCCAGCTTCAATCTGGGATGACCACGTGGCGCCAGACAGCTCAAGGTCAGATTCGAATGATTCTGCCGAAATTTGCTAACCATGGCGATGTTATTCGGACACACGACATCGATGGTTTGAACGCTATCAATCACTCGACCTTAGAGGTTTACCCAGATTCCGGTCATAGCATCAATGAAGCAGGTGTTTCTAAAGTTGAATCTCGAACTTCTGGCTATGGCTCTTTTGTGTTCGACGAACCCTCTAAGACATGGGAGATTTGGGACGGTGACCAGCGTACCCGTATTCGTGTGACTAAAGCTGATACGTCGGTTATGCCATTTGAACATATTCTTGTTACTGGTGACGGCACTTCAGCCAGCCGCACAGTTACATTGACCTTGCCGGAAAAAGTTGCTATCGGCGATCGTGTTCAGGTAACAATGGATTATATGCGCCGCGCGCAGACTTGTACAATTCGTGTAAAACCTAATTCAGGTGAAGTAATTGTTGGGTCTAAAGCTCAAATGCAATTCCAACGTAGGTCAGAATATCCAGCAATCAATGGGTGGGAACTTGTTTCATCCGTATCGATTAACGCCGACACTGATTACGTCCCGTACGTAGAATTGATGTATGCTGAATTGGATCCAGCCCTAGTTGGTGTTACTGGCTCAAAATTCGGTTGGATGTTTGGCCAAGTTCAGCCTAAAGTTGAACGAGTCGATGCTACTCAACGCGACCGTCTCGGTGTTGCTGCTCTTGCTGCTCAGTCCGAAGTCGATAAAAACCATGAACAAAATCCAAACGACGAGACAATCGTAACTCCGCTTACTTTGTCGAGAAAAACTGCTACTGAAACCCGTCGTGGTATTGCTCGCATTGCAACAACCGGTGAAGTTAGCCAAATTTCGACAGCGACATACCTAGATGATGTCATTGTTACACCGAAAAAGTTGAATGCGCGAACCGCGACCGAAACCCGTCGAGGCCTCGCCGAAATCGCAACACAAGGTGAAGCAAACGGTTCAACTGACGACACAACAATTGTAACTCCTAAAAAGTTGCATAACCGTGTTGCATCTGAAACATTGACTGGTATCTTGGCAATTGTCAAAAAATCCGGAACTCCGGGAACTGCTCGCAATTTGGCCGGAGTCGGTGTTTATAACCGTGCCGACCATCTCCGGGCTGTAACTCCAGCAACTCTGGATGAGTTCGTAGCAACTGAAACAGCTAAGGGTGTAGGATATATCGCGACTCAGCTTGAAGTTGACGGTGGATCGACCGATTCCAACGGGCCTCTTCTTGTTACCGCTGAACGCTTAGCAGCTCGCCGAGCTTCTGAGTCAAACCACGGGTTGATTGAAATCGCCACGCAAGCCGAAACTAATGCTGGTGTTGATGATACCCGCGCAATAACTCCGAAGAAGCTGAATGACCGAACTGCTCAAGAAGCTCGAACCGGTATCGCGGCTATTGCGACTCACGCCGAAGTTAATATCGGAACCGAAGGTTACAAAATTGTTAGTCCATTGAAACTTAAAACTCGTTTTGACAATATGTCGCGGGTTGAGGTTGATGGCGCTGCTGGTCTCACCCGATCTGGAACAATTTGGGATAAAGTCTCAATTGGGATTGTTCCTGCTACCGAATCGCAACGTGGTACCTTACGTGTTGCGACACAGGTGGAAGCAAATGGTTCGACCTCCGATGATACCATGATTACCCCAAAGAAACTTGATGGTCGCAAAGCCACTCGCTCTTTGGATGGTATTATTCGCATCGGGACAACAACCGAAGTTCGTGCAGGCACATTGAGTTCTGTTGCAGTCTGTCCGGCTGATTTGATATACATGATTCAAACTGAACCAACTTGGTCTGGAAATGAATCTCGTCGCGGTTCTGTAAAAACTGCCACAATGGAATCAACATTCGTTGGTAATAATACAGCTGGTTCAACACAAGCTTATACTTCGTATGCTAATGATGGCTTGGCTGTTAGTCCGCGCGGATTGAACTATGCTTTGCAGAACTTCCTTCCGAAAATGGCTACTGCACAAAATTCGCTGTCATTGGGTGGTGTTGTTGCTAATGATTGGATTCGCCGGACAGTTGCTCAAACCGTAACAGGTGCGATGACTTTCACCGCCGCAATGACTACTCAAGCCGTTACTGGAACAACATCAACTTTCAATCTGTCATTCATTGAGTCAAACAGGTCTGATGCATTGACAATTGGTTCTGCTAACAATATTGGTGTAACTGGTATCACCTTTATTGCCGGTAATAAGGGTTCCAACAAGTGGAAACTCTATGCTGGAAATGACAGCGCTGTTGACGGTGTTGGTGTTGGTGGTATTGGTTTTGCGCCGGGTGTTGATGGGCCTGTTTTACATGTCACAGTTGCTGGCGATTCGTGGACTAAACGAAACATTGTTTCACGAAATGGGCACTTGGTGCTTGAAGATGCAACTTCGCGTATCACAATGGGTAACTTGCATTTTGCATCAGTTAACACAGGCATAGTTGATATTGGTTCATCGTCAAGAAGTATGAAGCTTATATCCGCAAATGATAATGTCAAAATTAATAACTTTGATATAATCCATGCCGGTAACCAAGCCCAAAAATTGGACCCAATTTATCTTCGTCGTGACGGTGGAAACACCCAAACCGGCAAAGTCTTAGCTGCAATGAATGGCGACGTGAAATATAACACGTATCGCAACGATAACCGTTACATTTCATCTAGAGGCAACGACTTCGTATTTGGTAACACAGATACAACCAATGGCCGTGTATGCTTGGATTCAAACAAGAACCCAATTGTTAAGATTGGCAACTTTGAGTACGAAATTTACCACAAAGGTAACAAGCCTACAGCTCAAGACGTGGGTGCTGTTGATATCACTGGTTCAGCTGCAAATAATTTGACAATTCGCGATTGGATCAAAATTGGTAATGTTAAAATCGTTGCTAATAATTTGCTGAAAACCGTTGAATTTATCTGGGAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
188e9b777af1d686e39bf4ac696f32da457cd20fe1f2710509a8d3a34ea204e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5501
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank