Protein

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Genbank accession
UVT22886.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPDQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKATDYRQLRAATVADDLFIANLSVKPEADRTDVKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGAPGVGVQFMDGAVMATGSTKAPVYFEWGSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYRLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDAPAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAAVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91998,79130 Da
isoelectric point:6,18308
aromaticity:0,10775
hydropathy:-0,33487

Domains

Domains [InterPro]
IPR058003
TTP
1–817
IPR058003
DC_0058
STR
1–826
DC_0058
UVT22886.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVT22886.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9904
Central domain 140 338 200 0,2338
C-terminal 339 826 487 0,3621
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PNM
[NCBI] 		2975222 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVT22886.1 [NCBI]
Genbank nucleotide accession
OP292288 [NCBI]
CDS location
range 25973 -> 28453
strand +
CDS
ATGAGTTACAAGCAATCCGCGTATCCCAACCTGCTGATGGGCGTGAGCCAGCAAGTGCCCTTCGAGCGCCTTCCTGACCAGCTCAGCGAGCAGATCAACATGGTATCCGACCCCGTGTCAGGACTGCGGCGGCGCAGCGGTATCGAGCTGATGGCTCACCTGCTGCACACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCATACGAACCTAGGTGGCCGCAGCATCGCGATGCTGGTGGCCCAGCACCGTGGCGAGCTGTACCTGTTCGACGAACGGGATGGCCGCCTGCTGATGGGCCAGCCCCTGGTGCATGACTACCTCAAGGCTACCGACTACCGGCAGCTACGGGCCGCCACGGTGGCTGACGACCTGTTCATCGCCAACCTGAGCGTGAAGCCCGAGGCCGACCGCACCGATGTCAAAGGCGTGGACCCCAACAAGGCCGGCTGGTTGTACATCAAGGCGGGTCAGTATTCGAAGGCATTCTCTATGACCATCAAGGTCAAGGATAACGCCACGGGCACCACCTACAGCCACACGGCCACTTACGTGACGCCGGACAACGCCAGCACCAACCCCAACCTTGCCGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAGCTCTACGGTAAGTTCTTCGGGGCGCCGGAGTACACCCTTCCAAACTCCACGAAGAAATATCCGAAGGTAGACCCGGACGCCAACGCGGCGACCATAGCCGGCTACCTCAACCAACGGGGCGTGCAGGACGGGTACATCGCATTCCGTGGCGACGCCGATATCCACGTTGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCCTCCGGCGGTATGAGCCTCAACGCCACGGCAGACCTGCCGGCCTTGCTGCCGGGCGCTGGTGCTCCTGGCGTGGGTGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCCACCAAGGCCCCGGTGTACTTCGAGTGGGGTTCCGCTAACCGCCGATGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCTTGAAGAAGATGCCCCTGGCCCTGCGCTGGGATGAGGCCACTGACACCTACAGATTGAACGAGCTGGAGTATGACCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAATCCACACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCGGCCCAAGGGAGCCTGACTGAGCCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGGACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTTGGTACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTACAGAACGCGTTTCATCGCTGGACGTTGCGGCACCAGATCATTGGCGCCTACTTCACTGGCGACAACCTGATGGTTCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGTATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGCTGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCCCTGCCGTGTATCAGCTACAGCCCGTGGCCGGCGCCTACATGGAGCGTACCCATCTCGGTGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTCGGCTGTGAGTTCTGGTCGAAGGTGGAGTTCACTCCACCGGTTCTCCGGGACCACAACGGACTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCGGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGCGGTGCCGCTGCCGGCGCGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGTCACAGTCCGTACGACATGAACGTTCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d2d61da9176ed9eef230863aa05f7e894712758001b88261186827f7600b7380
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3033
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Quality-controlled small-scale production of a well-defined bacteriophage cocktail for use in human clinical trials Merabishvili,M., Pirnay,J.P., Verbeken,G., Chanishvili,N., Tediashvili,M., Lashkhi,N., Glonti,T., Krylov,V., Mast,J., Van Parys,L., Lavigne,R., Volckaert,G., Mattheus,W., Verween,G., De Corte,P., Rose,T., Jennes,S., Zizi,M., De Vos,D. and Vaneechoutte,M. 2009 19300511 GenBank