Protein

View in Explore
Genbank accession
ARM67959.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTQITGRKGGGGSPRTPVEQPDDLQSVAKAKLLIALGEGEFAGELTGKHIFLDGTPLLNADGSENFPGVVWEYRPGTQAQTYIQGMPAAENEITVGTTVQSSTPWAHAFTNPQLSAVRVRLKWPSLFRQEDNGDMVGNEVKYAIDLQTDGGSWRTVVDGRVKGKTTSGYERTHRIDLPQSVTSWTLRVRKITPDANSAKIGDTMVLQSYTEVIDAKLTYPHTALLYIEFDSKQFNGSIPQVTCEPKMRVIRVPSNYDPEHRTYSGTWDGSFKWAWTNNPAWIFYDIVISDRFGLGDRIKIQNIDKWELYRVAQYCDQPVPDGKGGSGTEPRYICDVYVQDRNEAYTVLRDFAAIFRGMTYWGGNQIITLADMPRDIDYSYTKANVLDGKFTYSGSSSKARYSSALVSYSDPLNGYADAMEPVFENELVYRFGFNQLEMTAIGCTRQSEANRKGRWGILTNNKDRVVTFGVGLDGNIPQPGYIIAVADENLSGKVTGGRVSAVNGRSITLDRKPDAAPGDRLMLNLPSGKSQARTIQMVTDNVITVTTEYSETPETECVWVTESDELYAQQYRVVSVTENDDGTFTISAAMHDPDKYDRIDTGAVLDERPISVIPPGNQFPPKDITISSYSVVNQGISIETMQVTWSPAENAIAYEAQWRRDDGNWINVPRNATTSFDVPGVYSGRYLVRVRAINAAEISSGWGYSEETRLTGKVGDPPMPLNFRAATLVFGIKLNWEFGKFTEDTLKTEIQYSKTNDGQNLLLLADVPYPSRSHELAGLAAGTAFYFRARLVDKTGNQSPWTEFVRGVAEFDASTIIDEVAAGLGDSQIIKDLQSQADDNFEAIINNANNAYGQWGYWQRETGLMKAEIIEVRNYTVTETTALAEKLDAVKVTADDSFAMAQNSIRAQWDMAAGEASVVHDMKVRIRYEGEDYSAGMVIGAELKGGEVNTLIGFNAQQFAFYNPVNKSMDLFMYMKGGQVFIREAFLDEAWIKSLLVIDKLQSENYDAGKKGFLIDAKTGKAELNDTIIRGTLYATDGEFAGTVYAQRIIGDVVTAGIYPAASAGSIYGDGGDWTTVKSTLTYVGGMPYAIALVLPTIIVGVEQYQGYPLGRLQGTEVNIRIDGVAQSVAGFGDVRSAVIFISAGRRDVKIEVEYRVRHTGSVGVRLAYGVVLACKYNSASFK
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 130482,86380 Da
isoelectric point:5,03545
aromaticity:0,10144
hydropathy:-0,30837

Domains

Domains [InterPro]
DC_0014
STR
1–1176
DC_0014
IPR053171
Unmapped
3–836
IPR053171 IPR015406
IPR055385
ATT
90–215
IPR055385 IPR032876 IPR003961 IPR003961
IPR003961
STR
620–699
IPR003961 IPR036116
IPR013783
STR
620–711
IPR013783
IPR036116
STR
632–698
IPR036116
ARM67959.1
1 1183
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-215 | STR 216-339 | ATT 340-502 | STR 503-1176 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARM67959.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 535 535 0,8217
Central domain 536 1055 521 0,0662
C-terminal 1056 1183 127 0,9022
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-535
Central
536-1055
C-terminal
1056-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Morganella phage IME1369_02
[NCBI] 		1965488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Morganella morganii
[NCBI] 		582 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM67959.1 [NCBI]
Genbank nucleotide accession
KY653119.1 [NCBI]
CDS location
range 3714 -> 7265
strand -
CDS
ATGACACAAATCACAGGCCGCAAAGGTGGTGGCGGCAGCCCGCGCACACCCGTCGAACAGCCGGACGATTTACAGTCCGTTGCCAAAGCCAAATTGCTGATCGCCCTCGGTGAAGGGGAATTTGCCGGTGAGCTGACCGGGAAGCATATCTTTCTGGACGGTACGCCGCTGCTGAACGCTGACGGGTCGGAAAACTTCCCCGGCGTGGTGTGGGAATACCGTCCCGGCACCCAGGCGCAAACCTATATTCAGGGGATGCCGGCAGCGGAGAATGAAATCACGGTCGGTACCACGGTACAAAGCAGCACGCCGTGGGCGCATGCATTCACCAACCCGCAGTTGTCTGCGGTCCGCGTCCGCCTGAAATGGCCGTCCCTGTTCCGCCAGGAGGATAACGGGGATATGGTCGGTAACGAAGTGAAATACGCCATTGATTTACAGACTGACGGCGGCAGCTGGAGAACCGTTGTGGACGGCCGTGTGAAGGGCAAAACCACTTCCGGTTATGAGCGTACTCACCGCATTGATTTGCCGCAGTCGGTCACATCCTGGACGCTGCGGGTGCGAAAAATCACACCGGATGCCAACAGCGCTAAAATCGGTGACACCATGGTGCTGCAGAGTTACACCGAGGTGATTGACGCCAAACTGACCTATCCGCATACCGCGCTGCTGTATATCGAGTTTGACTCAAAACAGTTTAACGGCTCCATCCCTCAGGTCACCTGTGAGCCGAAGATGCGGGTTATCCGTGTACCGTCAAACTATGACCCGGAGCACCGGACGTACTCCGGTACCTGGGACGGTTCGTTTAAGTGGGCGTGGACCAATAACCCGGCATGGATATTTTACGATATCGTGATTTCCGATCGCTTCGGCCTCGGCGACCGTATCAAAATTCAGAATATCGATAAATGGGAACTGTACCGCGTTGCGCAGTATTGTGATCAGCCGGTACCGGACGGCAAGGGCGGCAGCGGTACTGAGCCGCGTTATATTTGTGATGTGTATGTTCAGGATCGCAATGAAGCCTATACCGTGCTGCGTGACTTTGCGGCTATCTTCCGGGGTATGACCTACTGGGGCGGCAATCAGATTATCACCCTGGCGGATATGCCGAGGGACATTGATTACAGTTACACCAAAGCCAACGTACTCGACGGGAAGTTCACCTATTCCGGCAGCAGCAGTAAGGCCCGTTATTCCTCCGCGCTGGTGTCGTACTCAGATCCGCTGAACGGCTATGCCGATGCGATGGAGCCGGTGTTTGAAAATGAGTTGGTTTACCGGTTCGGCTTTAATCAGCTGGAAATGACGGCGATCGGCTGTACCCGCCAGTCAGAGGCGAACCGCAAAGGTCGCTGGGGCATCCTCACCAATAATAAAGACCGTGTGGTGACATTCGGTGTGGGGCTGGACGGCAATATCCCGCAGCCGGGCTACATTATTGCAGTGGCGGATGAAAACCTGTCCGGGAAAGTCACCGGCGGCCGCGTCAGTGCGGTGAATGGCCGGAGTATCACACTCGACCGCAAACCGGATGCCGCGCCGGGTGACCGGCTGATGCTGAACCTGCCGTCCGGCAAATCACAGGCCCGCACCATTCAGATGGTCACGGATAACGTGATCACTGTTACCACGGAATACAGCGAAACGCCGGAAACGGAATGTGTCTGGGTAACGGAATCAGATGAGCTGTACGCCCAGCAGTACCGGGTGGTGAGTGTGACTGAGAATGATGACGGCACGTTCACGATATCGGCGGCCATGCATGATCCGGACAAATACGACCGGATAGATACCGGCGCGGTACTCGATGAACGGCCAATCAGTGTTATTCCGCCCGGCAACCAGTTCCCGCCGAAAGATATCACCATCAGCTCTTATTCTGTCGTGAATCAGGGGATCAGCATTGAAACCATGCAGGTTACCTGGTCACCGGCAGAGAATGCCATTGCCTATGAGGCACAGTGGCGGCGTGATGACGGCAACTGGATCAACGTGCCGCGCAATGCCACCACTTCATTTGACGTGCCCGGGGTCTATTCAGGCCGCTATCTGGTGCGGGTCAGGGCGATAAATGCAGCGGAAATCTCCAGCGGCTGGGGGTATTCAGAGGAAACCCGGCTGACCGGCAAGGTGGGTGATCCGCCGATGCCGCTGAACTTCCGCGCGGCCACACTGGTGTTCGGGATCAAACTGAACTGGGAGTTCGGGAAATTCACGGAAGATACCCTGAAAACTGAAATTCAGTACAGCAAAACCAACGATGGTCAGAACCTGTTGCTCCTGGCCGATGTGCCGTACCCGTCCCGCTCTCATGAACTGGCCGGTCTGGCCGCCGGTACCGCGTTTTATTTCCGTGCCCGGCTGGTGGATAAAACCGGCAATCAGTCACCCTGGACTGAGTTTGTGCGCGGCGTGGCCGAGTTCGATGCATCAACCATTATTGATGAAGTGGCCGCCGGGTTGGGCGACTCTCAAATCATCAAAGACCTGCAGTCTCAGGCTGATGACAACTTCGAAGCCATCATCAACAACGCCAACAACGCTTACGGTCAGTGGGGCTACTGGCAGCGCGAAACCGGTTTGATGAAAGCCGAAATTATCGAAGTCCGCAACTACACGGTCACGGAAACAACTGCACTTGCAGAGAAACTGGATGCGGTTAAGGTGACTGCAGACGACAGTTTCGCCATGGCACAAAACTCCATCCGCGCGCAGTGGGACATGGCCGCCGGCGAAGCATCGGTGGTCCACGATATGAAAGTCCGGATCCGTTATGAGGGTGAGGACTATTCCGCCGGCATGGTAATCGGGGCCGAACTGAAAGGCGGGGAGGTGAACACGCTGATCGGGTTTAATGCGCAGCAGTTTGCATTTTATAACCCGGTGAATAAATCGATGGATTTATTCATGTACATGAAGGGCGGACAGGTGTTTATCCGGGAGGCTTTTCTGGATGAGGCGTGGATAAAGAGCCTGTTGGTGATAGATAAGCTTCAGTCTGAAAACTATGACGCCGGTAAAAAGGGATTCCTGATTGATGCCAAAACCGGGAAAGCGGAACTTAACGATACCATTATTCGCGGAACGCTGTATGCCACAGATGGAGAATTCGCCGGGACCGTCTACGCACAACGGATAATCGGTGACGTTGTTACGGCCGGTATTTATCCTGCCGCGAGCGCAGGGAGTATATACGGTGACGGCGGAGATTGGACGACAGTTAAATCGACATTGACGTATGTCGGCGGTATGCCTTACGCCATAGCACTGGTTTTACCAACTATTATTGTTGGCGTAGAGCAGTATCAGGGATACCCCCTGGGAAGATTGCAGGGGACCGAGGTAAACATACGTATTGACGGCGTTGCGCAGTCAGTCGCCGGGTTTGGTGATGTCCGCTCAGCGGTTATTTTCATTTCTGCGGGAAGGCGTGATGTGAAAATAGAGGTTGAGTACCGTGTCAGACATACCGGTTCTGTCGGCGTTCGCCTGGCTTATGGCGTTGTTCTTGCCTGTAAGTACAATTCAGCATCATTCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d6ddfa346e629c523cd022bd465884b4d51be8318a4c72d71ba27b07789b74a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7877
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank