Protein

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Genbank accession
WNL51033.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MSITFPDSPTLNQSYTAENGLNYVWDGEKWKTLGSFAADTGQYVLKDGTNTSVFADATTLGVNTTTPTETFEVSGGYILAGGGLKVQGGTAGTDGSIYRVDAAGTTGSYLIIEEESAHVEIGHRTPTSYFGVNFAVTQTVPAVPDVHCANTYIQSSIQGTSNTYGFSLDVTDTITSDTALYGVSITGSWDTSTAPSNYGIFTDIDASVTGNANYQFAAHGTAHSYFLGNVGIGTTSPDDKLELGGAGSGIILASPNGTRYRITVADDGTVTSTAV
Physico‐chemical
properties
protein length:275 AA
molecular weight: 28509,63110 Da
isoelectric point:4,22094
aromaticity:0,09818
hydropathy:-0,11600

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNL51033.1
1 275
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,1328
Central domain 159 264 107 0,3756
C-terminal 265 275 10 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-264
C-terminal
265-275

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51033.1 [NCBI]
Genbank nucleotide accession
OR473000 [NCBI]
CDS location
range 70167 -> 70994
strand +
CDS
ATGTCGATTACTTTTCCAGATAGTCCAACACTTAACCAGTCATATACCGCCGAGAACGGTCTCAACTATGTCTGGGATGGTGAGAAGTGGAAAACGTTAGGTAGTTTCGCTGCTGATACCGGACAGTATGTTCTGAAGGACGGAACCAACACTTCTGTCTTCGCTGACGCAACTACCTTAGGCGTCAATACAACGACCCCTACCGAGACTTTCGAGGTTTCGGGTGGATATATCCTTGCGGGTGGTGGACTCAAGGTACAGGGCGGTACAGCGGGCACTGACGGGTCAATCTATCGCGTTGACGCTGCTGGTACAACTGGTTCTTACCTAATTATTGAAGAAGAGTCGGCACACGTTGAAATTGGACATAGAACACCTACTTCTTACTTCGGTGTTAACTTTGCTGTTACCCAGACTGTACCTGCAGTACCTGATGTACACTGCGCCAACACATATATCCAAAGTTCAATTCAAGGAACGTCCAATACCTATGGTTTCAGTCTGGACGTAACTGATACTATCACCTCCGACACCGCACTGTATGGAGTTAGTATCACTGGTTCCTGGGATACCTCAACTGCGCCCAGTAACTACGGTATCTTTACCGATATTGACGCAAGTGTAACCGGTAACGCTAACTATCAGTTTGCAGCACACGGTACTGCACATAGTTACTTCCTAGGAAACGTTGGTATTGGTACTACTTCCCCAGATGATAAGTTGGAACTTGGTGGTGCGGGTAGTGGTATTATCCTGGCGTCACCCAACGGAACTCGTTACCGTATTACTGTTGCCGACGACGGCACAGTGACCTCTACCGCTGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f7a68343e3574bcfd495501281ac023a69e6a762bfa453c16c5ecd0f766f277
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6383
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank