Protein

Genbank accession
QPI17216.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,56
Protein sequence
MALVSQSIKNLKGGISQQPDILRYPEQGAVQINGWSSETQGLQKRPPLLFTKALGVAGYLGEKPYVHLINRDEFEQYFAVFTGSDVKVFDMTGHEYTVRGDRSYITVTNPREDLRMVTVADYTFVVNRTKVIKVSPVKSNGGTFRDDGDALINIRGGQYGRTLRVIINGTEAAKYQIPNGSAPEHVKNTDAQFLATTLQAQMVTNLGSAGWTFTVGQGYIHIQAPAGTAINTLTTEDGYADQLINPVTHYTQTFTKLPLNAPDGYLVKIVGDTSKTADQYYVVYDAKQKVWKETVGWNQLTSWDDQTMPWTLIRAADGNFDLKPQDWVDRKAGDDDTNPFPSLEDSQINDVFFFRNRLGFLSGENIVMSRTAKYFDFFPPSVANLSDDDPIDVAVSHNRVSILKYAVPFTEELLLWSDEAQFVLGAAGVLSSRSVELNLTTQFDVQNLARPYGIGRNIYFSSPRASYSSIERYYAVQDVTRVKSAEDVSAHVPSYIPNGVFSIHGSSTENFASVLTEGAKGKIFIYKFLYVDEVVRQQSWSHWDFGDNVTVYSAATIGSRMYTLMGNGVSCWLGEVNFTKDSVDIESEPYRLYIDNKTEYVIPAGSYNLDTNETTFSLTNVYGMASAKGAVSIVEPDGRTSYIPEPDGGWAVHPNISLPNDMSGIGVFVGFNIQFHYEFSKFLIKKSADDGSVATEDIGRLQLRRAWVNYEDSGAFTIQVENQSRMFQYEMAGGRLGSSNLRVGRLNVGTGQYKFPVVGNATYNVVRILSEATTPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 88173,60880 Da
isoelectric point:5,26149
aromaticity:0,11587
hydropathy:-0,28249

Domains

Domains [InterPro]
IPR058003
1–794
IPR058003
QPI17216.1
1 794
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage phiPccP-1
[NCBI] 		2768689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17216.1 [NCBI]
Genbank nucleotide accession
MW001769 [NCBI]
CDS location
range 24756 -> 27140
strand +
CDS
ATGGCATTAGTAAGCCAAAGCATTAAGAACCTTAAAGGTGGTATCTCACAGCAGCCAGACATCCTAAGGTATCCCGAACAGGGAGCCGTACAGATTAACGGCTGGTCGTCTGAGACCCAAGGCCTCCAAAAGAGACCCCCATTGTTATTCACTAAGGCCTTAGGGGTCGCTGGGTATCTAGGCGAGAAACCTTATGTCCACCTGATTAACCGTGATGAATTCGAGCAATACTTTGCGGTCTTCACAGGGTCAGACGTTAAGGTCTTTGATATGACAGGCCATGAGTATACGGTACGTGGTGACCGTTCATATATCACAGTGACTAACCCAAGGGAAGACCTAAGGATGGTCACAGTGGCTGACTATACGTTCGTAGTGAATCGAACGAAGGTCATCAAGGTCTCTCCAGTTAAATCCAATGGTGGGACTTTTAGGGATGATGGGGACGCCCTAATTAATATCAGGGGTGGGCAATATGGTAGAACCTTGAGGGTTATTATTAATGGGACTGAAGCAGCCAAGTATCAAATACCGAACGGTAGCGCTCCAGAGCACGTAAAGAACACTGATGCGCAGTTCTTAGCGACTACCCTTCAGGCTCAAATGGTTACTAACTTAGGGTCTGCCGGATGGACATTCACGGTAGGTCAAGGATACATTCACATTCAGGCACCAGCAGGTACAGCCATTAATACCCTCACCACAGAGGATGGCTATGCTGACCAATTGATTAACCCTGTGACCCACTACACTCAGACGTTCACTAAGCTCCCCCTTAACGCGCCTGATGGCTACCTTGTGAAAATCGTAGGGGACACCTCAAAGACTGCCGACCAGTATTATGTAGTTTATGACGCTAAGCAGAAGGTCTGGAAGGAGACCGTAGGTTGGAACCAATTGACCTCATGGGATGACCAGACGATGCCTTGGACTCTCATTAGGGCAGCAGATGGTAACTTCGACCTTAAGCCACAGGATTGGGTAGACCGTAAGGCTGGTGATGATGACACTAACCCGTTCCCCTCACTGGAGGATTCACAGATAAACGATGTGTTCTTCTTCAGGAATCGCTTAGGGTTCCTTTCAGGTGAGAACATTGTGATGAGTCGAACAGCTAAATACTTTGACTTCTTCCCACCGTCCGTAGCCAACTTAAGTGACGATGACCCGATAGATGTGGCGGTAAGTCATAACCGTGTGTCAATCCTGAAATATGCCGTTCCGTTCACTGAAGAGTTGCTCCTGTGGTCTGATGAGGCTCAGTTCGTTCTGGGAGCAGCTGGTGTCCTATCAAGTCGAAGCGTGGAGTTAAACCTTACGACACAGTTCGATGTGCAGAACCTAGCGAGACCTTACGGTATTGGGCGTAACATCTACTTCTCGTCACCTAGAGCCTCTTATAGCTCCATTGAGCGCTACTATGCAGTACAGGACGTTACTCGTGTTAAGTCTGCCGAAGATGTCTCAGCGCACGTTCCAAGCTACATCCCTAACGGTGTCTTCAGTATCCACGGGTCATCCACGGAGAACTTTGCGTCTGTCTTAACGGAAGGAGCTAAGGGCAAAATCTTCATCTATAAGTTCCTTTATGTAGACGAAGTGGTACGCCAACAGTCATGGTCTCATTGGGACTTTGGGGATAACGTCACGGTCTACTCAGCGGCTACCATAGGTTCCCGTATGTACACCTTGATGGGTAATGGTGTTAGTTGCTGGTTAGGTGAAGTGAACTTTACGAAGGATAGTGTTGACATTGAGTCTGAACCTTATCGACTCTACATAGATAACAAGACCGAGTATGTTATTCCAGCTGGTAGCTACAATCTGGACACCAATGAGACCACTTTCAGTCTAACCAATGTGTATGGCATGGCGAGTGCTAAAGGGGCTGTCTCTATTGTGGAACCTGACGGTAGGACTAGTTACATACCTGAGCCTGATGGGGGCTGGGCAGTTCACCCAAACATCTCACTTCCTAACGATATGTCTGGCATTGGGGTGTTCGTAGGGTTCAACATTCAGTTCCATTATGAATTCTCTAAGTTCCTCATTAAGAAGTCAGCTGATGATGGCTCTGTAGCAACGGAGGATATCGGTCGGTTACAGCTTCGGAGAGCTTGGGTCAACTATGAGGACTCTGGGGCGTTTACGATTCAGGTAGAGAACCAATCACGGATGTTCCAATATGAGATGGCTGGAGGTCGCCTAGGGTCTAGTAACCTAAGGGTGGGACGATTGAATGTAGGTACTGGACAATACAAGTTCCCTGTGGTTGGTAATGCTACTTATAACGTTGTGAGAATCCTTAGTGAAGCCACAACGCCACTTAACGTAATTGGCTGTGGATGGGAAGGTAACTACATTCGGAGGTCAAGCGGTATTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
23558420f6fcb1b3e868039161b45752dff41e458728dcfb2a977bb1ce424bf0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2369
Evidence 0,2369
Download PDB

Literature

Title Authors Date PMID Source
Biocontrol of Soft Rot Caused by Pectobacterium odoriferum with Bacteriophage phiPccP-1 in Kimchi Cabbage Lee,S., Vu,N.T., Oh,E.J., Rahimi-Midani,A., Thi,T.N., Song,Y.R., Hwang,I.S., Choi,T.J. and Oh,C.S. 2021 33917817 GenBank