Protein

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Genbank accession
XHY54299.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSINRIRGDGGVIIDSKSFLELPKAPSKETADVIRSGMIRYNKEWKSFEGVLDFEDGTMAYRRFANLDANGKLLTSQLPDSVTSGLQFVGTYNPIPDDIDPPLAQTPLPAPAASLNGDYYVVRGIMDAAQAHYEANNPQTSPVTFTPTNPTGQGNWIEILYYVDSNPNISGAKLVTYAFARIIPASIPSTGHDGLKNLATDADLTKPFASGVPMNQTALSDGDWIIITEDKNIRLRQSRTSISAASVLYDNTVMIANHRQFRTNAGTVQTSIDNVVIECLRRTGDSMYNDGTDGSGRFGVVYGSAAAPALTFNNNPFDPTNNPGNDPAKWSDANTGIFHPADDAIGFSTAGTERVRINNSTLTLYQSTSTPATTPVLRFDNATNTNVGLSASSNIISFSSMNKVQVEFKNGESAFHGNIVVDGTSTLTGDTSASNITASGNLNIQGNTTLGDAASDTITVNGVSTFTANTNFNGTSNKFKNINLLANGIITLESTTNQSTIQLVSSDLKLSMGNYADVSIYDNGTIRTRFNRYGIQLPVLATIDNSVGVDGMIAYSNTERTSMQKVQGQWVPIGSGSVRTDAFTISSWVLSGNYYTLTVTASNIVTAEIQEQVSPGVYTRVEVDSVTFNGTNVVFSIPSTPDVRFDGRTLVTIR
Physico‐chemical
properties
protein length:654 AA
molecular weight: 70144,94820 Da
isoelectric point:4,87067
aromaticity:0,07951
hydropathy:-0,23700

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHY54299.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,8600
Central domain 225 425 202 0,3529
C-terminal 426 654 228 0,8687
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-425
C-terminal
426-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JP4
[NCBI] 		3349802 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY54299.1 [NCBI]
Genbank nucleotide accession
PQ330092 [NCBI]
CDS location
range 288338 -> 290302
strand -
CDS
ATGAGTATAAATCGAATTAGAGGTGATGGTGGTGTAATTATTGATAGTAAATCTTTTTTAGAGTTACCTAAAGCACCATCAAAAGAAACCGCTGATGTAATAAGATCAGGGATGATTAGATACAATAAAGAATGGAAATCATTTGAAGGTGTTCTGGATTTTGAAGATGGTACTATGGCATATCGACGTTTTGCAAACTTAGATGCAAACGGTAAACTTCTTACTTCCCAATTACCAGATTCAGTAACTAGTGGTTTACAATTTGTTGGTACATATAATCCCATCCCAGATGATATTGATCCACCTTTAGCACAAACTCCACTTCCAGCACCAGCAGCATCACTAAATGGTGATTATTATGTTGTTCGTGGTATTATGGATGCCGCACAAGCCCATTATGAAGCAAATAATCCACAAACAAGTCCTGTTACATTTACTCCCACAAATCCAACTGGACAAGGTAATTGGATTGAAATTTTATATTATGTTGACTCTAATCCAAATATATCTGGTGCTAAACTAGTAACATACGCTTTCGCTAGAATTATTCCTGCATCTATTCCGAGTACTGGTCATGATGGTCTTAAAAATTTAGCAACAGATGCTGACTTAACCAAACCATTTGCTTCAGGTGTTCCAATGAACCAAACCGCACTATCAGATGGTGATTGGATTATTATAACTGAAGATAAAAACATACGTCTACGCCAGTCAAGAACAAGCATTTCCGCTGCTTCAGTATTATATGACAATACTGTAATGATTGCAAATCATCGTCAATTTAGGACAAACGCAGGGACCGTTCAAACATCCATAGATAACGTTGTGATTGAGTGTTTACGTAGAACTGGTGATTCTATGTATAATGATGGAACAGACGGCTCTGGACGTTTTGGGGTGGTGTATGGAAGTGCAGCAGCACCAGCATTGACATTTAATAATAATCCGTTTGACCCAACGAATAACCCAGGTAATGACCCAGCGAAGTGGTCCGATGCTAATACTGGTATATTTCATCCAGCCGATGACGCAATTGGGTTCAGTACTGCTGGTACAGAACGTGTTCGAATTAATAATTCAACACTAACATTATATCAATCAACATCAACACCTGCAACAACACCAGTACTCAGATTTGATAATGCAACTAATACTAATGTAGGATTAAGTGCTAGTAGTAATATTATTTCATTTAGTTCAATGAATAAAGTTCAAGTTGAATTTAAAAATGGCGAAAGTGCGTTTCATGGTAATATTGTTGTTGATGGTACAAGTACATTAACTGGGGACACATCAGCTAGTAATATAACTGCTAGTGGTAATCTGAACATTCAAGGTAATACCACATTAGGTGATGCTGCATCAGATACCATTACAGTTAATGGTGTTAGTACTTTTACAGCAAACACAAATTTTAATGGAACAAGTAATAAATTTAAAAATATAAACTTATTAGCTAATGGTATTATTACTTTAGAAAGTACTACAAATCAAAGCACAATACAATTAGTAAGTTCCGACTTAAAACTATCAATGGGAAATTATGCTGATGTAAGTATCTATGATAATGGAACCATAAGAACACGTTTCAACAGATATGGTATTCAATTACCAGTACTAGCTACTATTGATAACTCTGTTGGCGTTGATGGTATGATTGCATACTCCAATACCGAGCGTACTTCAATGCAAAAAGTTCAAGGTCAATGGGTTCCAATTGGTTCAGGTTCAGTGAGAACCGATGCTTTTACCATTTCATCTTGGGTCTTAAGTGGTAACTACTACACCCTTACTGTAACAGCCTCAAACATCGTCACAGCAGAGATACAGGAACAGGTTAGTCCTGGTGTCTATACTCGTGTTGAGGTCGATAGCGTGACGTTTAACGGCACTAACGTAGTGTTCAGTATACCTTCAACACCTGATGTACGTTTCGACGGAAGAACATTGGTAACAATTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19716216ddee2a47068f006fef8b6ad625e995ba6a38521e010edde758e92a0d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel jumbo phage JP4 with potential to control drug-resistant pathogenic Escherichia coli Zhang,K., Wei,X., He,B., Liao,J., Wang,J., Le,S. and Lu,S. 2025-11-25 — GenBank