Protein

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Genbank accession
AGN51528.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTKSYDELLTDLSSYNERTKTATETYESSLGDIVTATTEVVKDRNNANKWASEVEDTLVDDGVNTPDYSANHYSKKAAASAGLAATIADPYKGLWPDTGGSAEKGDEYQTQTGGTPTGQYFTALQNTTVGPTSDDVNWRGVVSNQSVGGLTNYQASSVANMINGLTSGGCVVTLQLDQRWVVDDYYGGSNPNNSGSLFFKVVPVGTGTADGGKYIDVLGGVFQLEQNLNKRYSVKAWGAVLDQDMTIPTQNTLDYVSSIGGGSVYGAEGINYLSIANSRHRHPDDNTARICLLLPENVSLRGLGKDITTYQRVVAERNVNGVLMCNENYDRNGGFTADGNIEVHDFSITDGAASPNRAIGDLIGIGHCKTFKAYNIKGLNHDLHLFDICASDDVYIDKTCEGFNEVLDISASTVQIDGATSLGIWGLFQDSTATKNIDVFGNYKNIGALRTIDLFHADGINYENINIDCDVDGAYVANGSCVGASPSKNINVNGLTVKGELISNHSTSVPLDLVINPVAGKKVDDVDIDVKVKSPGKGGVRVGQGTAGVAGRWGTVTTKVRGKVESTYSGSNTEIFGAQYTAIDNIFISPEDNITISKQSLPGVNVMAALLLQDVKGDSDGGRYSCGLLDGGTNKRVAPIIVRHFFSVIRPFDLRISKPILEALSGCGHHLMGEDEFGGALTSNDEILMTEAKFIGSAAISNIHEPIKISDGSNGYRQVQLDGSTFNEFPITSPEFYINRNIGMKKTGDADSPVRIKLEYAPNPGTLDTDQEDLNFAYISATQCAGTQIVDIQPSLGVFSIVTGSDGVSAVINNTTGQPALRASGVIKAWASI
Physico‐chemical
properties
protein length:833 AA
molecular weight: 88729,48870 Da
isoelectric point:4,74977
aromaticity:0,07443
hydropathy:-0,23421

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGN51528.1
1 833
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,9942
Central domain 247 710 465 0,9722
C-terminal 711 833 122 0,9090
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-710
C-terminal
711-833

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage eugene 12A10
[NCBI] 		573172 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN51528.1 [NCBI]
Genbank nucleotide accession
HQ634195.1 [NCBI]
CDS location
range 54837 -> 57338
strand +
CDS
ATGACTAAAAGTTATGATGAATTGCTGACTGACCTCAGCTCTTACAATGAAAGAACCAAGACTGCTACAGAGACTTACGAATCATCACTGGGTGATATTGTAACTGCAACAACTGAAGTGGTAAAAGATAGAAACAATGCAAATAAGTGGGCTTCTGAGGTAGAAGATACATTGGTTGATGATGGTGTAAACACACCAGATTATTCAGCTAATCACTACTCTAAGAAGGCTGCTGCTAGTGCAGGTTTAGCAGCAACTATTGCTGATCCTTATAAAGGATTGTGGCCTGATACTGGAGGTAGTGCTGAAAAGGGGGATGAATACCAAACTCAAACAGGCGGTACACCTACAGGTCAGTATTTTACAGCATTGCAAAACACAACCGTCGGCCCTACCAGTGATGATGTAAATTGGCGGGGAGTTGTTAGTAATCAGTCAGTAGGTGGCCTAACAAACTACCAAGCCTCTAGCGTTGCGAATATGATTAATGGCTTAACTAGTGGCGGGTGTGTTGTAACTTTGCAGCTTGATCAGCGGTGGGTTGTAGATGATTATTACGGTGGATCGAATCCAAACAATTCAGGATCTCTATTCTTCAAGGTTGTACCTGTTGGGACTGGCACGGCTGATGGCGGTAAATACATTGATGTCCTTGGAGGGGTGTTCCAACTAGAGCAGAATTTAAATAAAAGGTATTCCGTTAAAGCTTGGGGTGCCGTGCTAGATCAAGACATGACCATACCCACGCAAAATACACTTGATTACGTTTCAAGCATTGGTGGCGGCAGCGTGTATGGCGCGGAGGGTATTAACTATTTAAGCATCGCCAATTCAAGACATCGCCACCCTGACGACAACACAGCAAGAATATGCCTGCTTCTTCCAGAGAATGTAAGTCTTCGAGGTCTAGGTAAAGATATTACCACATATCAAAGAGTTGTTGCCGAGAGAAATGTTAATGGCGTTTTAATGTGCAATGAGAATTACGACCGGAACGGTGGGTTCACTGCTGACGGTAATATTGAGGTTCATGACTTCTCAATTACAGACGGGGCTGCATCTCCGAATAGAGCAATAGGCGATTTAATTGGTATAGGTCACTGTAAAACATTCAAGGCATACAACATTAAAGGGTTAAATCATGATTTGCATCTTTTTGATATTTGCGCGTCAGATGATGTTTATATCGACAAAACGTGCGAAGGGTTCAATGAAGTCTTGGATATATCAGCATCAACAGTGCAAATAGATGGTGCTACTAGTTTGGGTATTTGGGGTTTATTTCAGGACTCAACCGCCACCAAGAATATTGATGTTTTTGGTAATTACAAGAATATTGGAGCACTCAGAACTATTGATCTATTTCATGCTGACGGTATTAATTACGAAAACATAAACATAGATTGTGATGTTGATGGGGCTTATGTGGCCAATGGTTCATGTGTTGGGGCGTCCCCAAGTAAAAACATTAACGTCAATGGGCTGACCGTAAAAGGAGAGCTTATATCAAATCACTCAACATCAGTTCCGCTCGACTTGGTTATAAATCCAGTGGCAGGAAAGAAAGTTGATGATGTTGATATTGACGTTAAAGTAAAATCGCCGGGGAAAGGAGGGGTAAGAGTTGGTCAGGGGACGGCTGGTGTGGCTGGCAGGTGGGGCACTGTAACAACAAAGGTGCGGGGAAAAGTCGAGTCAACATACTCAGGTTCTAATACTGAGATATTTGGCGCTCAATACACAGCTATAGATAATATATTCATATCACCAGAAGACAACATCACAATAAGCAAGCAATCATTACCGGGCGTCAATGTTATGGCTGCTTTGCTTCTTCAGGATGTAAAGGGAGACTCTGACGGGGGAAGGTATTCGTGCGGATTACTGGATGGCGGGACAAATAAGCGTGTTGCCCCTATTATTGTGCGACATTTCTTTTCGGTGATTAGGCCGTTTGATTTGAGAATATCAAAACCGATACTGGAGGCGCTAAGCGGTTGTGGTCATCACTTAATGGGTGAGGATGAGTTTGGAGGTGCATTAACTTCAAATGATGAAATATTAATGACCGAAGCAAAATTTATTGGTTCAGCAGCTATATCAAACATTCACGAGCCTATAAAAATAAGTGATGGATCAAACGGATACAGACAAGTACAACTTGACGGATCTACCTTTAATGAGTTTCCAATAACCTCCCCAGAATTCTACATAAACAGAAATATTGGAATGAAGAAAACAGGTGATGCTGATTCCCCTGTTAGAATAAAACTAGAATACGCACCAAATCCCGGAACTCTAGACACAGACCAAGAAGACCTTAACTTTGCCTACATTAGCGCGACGCAGTGCGCAGGGACGCAAATTGTTGATATACAACCATCGCTTGGAGTGTTCAGCATTGTTACAGGTTCGGATGGTGTTAGTGCCGTTATAAACAACACTACAGGTCAACCAGCATTGCGCGCATCGGGAGTGATTAAGGCATGGGCTAGTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64ffa988f3e56b5d3fe74cdd9c557bd85a51224a0e475d935ad2c3b9e10889a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6825
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage eugene 12A10 Henn,M.R., Polz,M., Kauffman,A.K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank