Protein

View in Explore
Genbank accession
XFC54085.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MADLKLGTTLGGAGIWSQANLPLLPSGNTITYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKAGDTMQGTLELQGSTTELKLPYRIAMVRATEPYLVATRTDNNPVTNGFPSVETRTFVIHSKTTSSTSDPNLGANLVDLICTQRPAGGGAYYIRAFGAPNTTTGAAGAVRAELQMLGDNGLVSLTGTQFNIGMQTVVSGTIFGTQMSIKGDGTRNLYFQDAGGNELGLVYADTGKNVYVRTGGGAYTTRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVGVDYDSQGTNSAILRVDTSGDGNGVGDGVTHLGYKDGNGRYNHYFRGTGSIYLTNKLGTIFTSQSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGTYRLATGSTDAQEEFQITSAGNIRARVEVQSSSCGSAGQFRAVQGDYGFFIRNDGNNTYFMLTPSGNPYGTWGTLRPLTISNSAGTVTMSNGVNVGSGLDVSGAAKFNNGLGCGTANGLGAAAISLGDNDTGFVQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDIDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:737 AA
molecular weight: 78360,08330 Da
isoelectric point:5,66522
aromaticity:0,08277
hydropathy:-0,30054

Domains

Domains [InterPro]
DC_1159
STR
1–373
DC_1159 IPR048390 G3DSA:6.20.80.10 IPR051577 Coil
DC_1202
STR
337–737
DC_1202
IPR030392
CHP
640–735
IPR030392
IPR030392
CHP
640–698
IPR030392
XFC54085.1
1 737
Architecture
STR
ATT
STR
STR 1-411 | ATT 412-473 | STR 474-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC54085.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 464 464 0,1326
Central domain 465 663 200 0,1868
C-terminal 664 737 73 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-464
Central
465-663
C-terminal
664-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage Taquito
[NCBI] 		3239072 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae complex
[NCBI] 		354276 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Enterobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC54085.1 [NCBI]
Genbank nucleotide accession
PQ096441 [NCBI]
CDS location
range 167347 -> 169560
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTGGGTGGTGCGGGTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAGTCTACACCGAAAACGACAAACCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGTGATACAATGCAAGGAACTTTGGAATTACAAGGTTCTACAACTGAATTGAAATTACCATACAGGATCGCAATGGTTAGGGCAACAGAACCGTATCTCGTTGCAACTCGCACAGACAATAACCCAGTAACAAACGGATTTCCCAGCGTAGAAACACGTACATTTGTTATACATTCAAAGACAACTTCATCGACGTCAGATCCAAACTTGGGGGCAAATCTTGTTGATCTGATTTGTACCCAACGCCCCGCGGGTGGTGGTGCTTATTATATCCGTGCTTTTGGCGCACCAAACACGACAACTGGTGCTGCTGGGGCTGTCCGTGCTGAATTACAAATGTTGGGTGATAATGGTCTTGTTAGTTTAACAGGGACGCAATTCAACATCGGGATGCAGACCGTTGTTAGTGGTACGATCTTTGGTACGCAAATGTCTATCAAAGGTGATGGAACTAGAAACTTATATTTCCAGGATGCTGGAGGTAATGAACTGGGTTTGGTCTACGCCGATACAGGAAAGAACGTGTATGTTCGTACTGGTGGTGGTGCATACACAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACCGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTGTTCAATAACCGTGCTTCTGTAGGCGTAGATTACGATTCGCAAGGAACAAACTCAGCGATTCTTCGTGTTGATACAAGCGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGGTATAAAGATGGTAACGGAAGATATAACCATTATTTCCGTGGTACTGGTTCAATTTATCTGACTAACAAATTAGGTACTATCTTTACGTCACAATCATATTATAATGATGTTCCCCAGGGTACGCCAGCGCAATATTTCTTGCCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGTCAATTCCGTGGTGGTAATGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTACATATCGTTTAGCAACAGGCAGCACCGATGCACAGGAAGAGTTTCAGATCACCAGTGCTGGTAATATCCGCGCCCGTGTTGAAGTTCAGAGTTCTTCATGTGGTTCCGCTGGACAGTTCCGAGCGGTTCAGGGCGACTATGGATTCTTTATCCGAAACGATGGAAACAACACCTATTTTATGTTGACTCCTTCCGGCAACCCTTACGGTACATGGGGTACTCTGCGTCCGCTTACGATAAGCAACTCCGCCGGGACAGTAACAATGTCAAACGGTGTTAACGTTGGCAGTGGATTAGATGTCAGTGGTGCTGCTAAGTTTAATAACGGTCTTGGTTGCGGAACTGCAAACGGTTTAGGCGCTGCTGCGATTTCGCTAGGTGATAATGATACAGGTTTTGTTCAAGAAGGTGACGGTATTCTTAACGCTTACGCAAACAGCCAGCGTATTATGCGATGGACTACTGGCGCAACTGCTAACTATAAACAGTTGCAGGTTCAGGGTGTTAACGGGCCAGCATTACTTCTGAATAACACAGCGACTAACCAATCATGTTATTTGCTGATTACTTTGGCGGGTAACAACGGTGCGTACTTCGGATTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACAACCTTACAATTACGTACTTCGGATCTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCTGATATTCGACTGAAATCTAATTTGGTTGAATTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTACATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATATCATCGTGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTACCGGAAGCAGTGCGCGAAGACATCGACACTGGTATGTTAACCATTTCACCTTCGGGAATTAACGCGCTTCTGGTCAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
817483d22aee3b000c8267063e2975b80fc750d821d7884134629e0607b8b0b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rational Design of Frontline Institutional Phage Cocktail for the Treatment of Nosocomial Enterobacter cloacae Complex Infections Subedi,D. and Barr,J. 2024-07-01 — GenBank