Protein

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Genbank accession
XNL98012.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDFFTQPKGSTIGVLRDGRTIQEAIDDLYVFKDSQGFINVDMQTGATLEEKLRNSFTIANTLLVGVRLTAGKVYPLTGTTPLEVNLAKFSLFTSGGRATIDASEFTGPTALWIHATGSYPTPMYRNTTNYMESIELVGGLKAGVDGWTWGNRGMTTGTEYNGQCIIRGCSVYKFDNCIKCTDSSWRYKVSDCMISTGITSVFNAPAGLIDSGESITFSDTQFSDSNGAKFIIACANFSVGMSGTSVLNTPVVISGNGASLLIDGMGNNENPGKSSWMRYVEVTGIGARFILQSSTLVCNGPSSQTRPLVLVGAKARAIFIAVKFPGNLYMFHADNPEKVRTFCEGEGIVKTIACTYDIESGAGNIPVHRSLNRFYNNGFEQDLAGWALNVGGDPAQTATIVTDDTNSGGKAVKVASLDGKSVFLTQNVRVSSGEEFASFVAYKVNKAASGSTPGNLTVTFKSENGTTIGTGSTSNFSNTVGAWQQGGLFCRGVAPVGAVSAEISLRVRDGAEVILDDVIVNFL
Physico‐chemical
properties
protein length:523 AA
molecular weight: 55576,98460 Da
isoelectric point:5,47242
aromaticity:0,09178
hydropathy:-0,01224

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0903
G3DSA:2.60.120.260
STR
371–521
G3DSA:2.60.120.260
IPR008979
STR
373–522
IPR008979
XNL98012.1
1 523
Architecture
ATT
STR
ATT 1-40 | STR 41-522 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL98012.1
1 523
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9635
Central domain 48 369 323 0,9939
C-terminal 370 523 153 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-369
C-terminal
370-523

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RAD13
[NCBI] 		3389929 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae ATCC 43816
[NCBI] 		1316582 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL98012.1 [NCBI]
Genbank nucleotide accession
PQ803403 [NCBI]
CDS location
range 27531 -> 29102
strand +
CDS
ATGGATTTCTTCACTCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTATCCAAGAGGCTATTGACGACCTGTATGTGTTTAAGGATTCTCAAGGATTCATAAACGTGGACATGCAGACTGGTGCCACCCTTGAGGAGAAGCTGCGCAATTCCTTTACGATAGCCAATACGCTACTTGTGGGCGTACGCCTGACGGCTGGTAAGGTATACCCGCTGACTGGCACAACTCCGCTAGAGGTGAACCTAGCTAAGTTCTCGCTGTTCACTTCAGGAGGCCGCGCTACGATTGACGCCTCAGAGTTCACTGGGCCGACTGCGTTGTGGATTCACGCCACAGGCTCCTATCCGACACCCATGTATCGAAACACGACCAACTACATGGAGTCCATCGAGCTTGTGGGTGGGCTTAAGGCTGGCGTCGACGGGTGGACTTGGGGTAACCGTGGGATGACCACCGGAACCGAGTACAACGGTCAGTGTATAATCCGTGGGTGCAGCGTCTACAAGTTCGACAACTGCATCAAATGTACCGACTCGTCTTGGCGCTACAAGGTATCTGACTGCATGATTTCTACCGGAATCACCTCTGTGTTCAACGCCCCTGCTGGACTGATTGACTCCGGCGAGTCCATAACCTTCAGCGACACTCAGTTCTCCGACTCGAACGGGGCTAAGTTCATCATTGCGTGTGCAAACTTCAGTGTAGGCATGTCCGGCACAAGTGTGCTCAATACCCCGGTTGTTATCTCTGGGAATGGTGCTTCACTGCTCATCGACGGCATGGGGAACAACGAGAACCCCGGTAAAAGTTCTTGGATGCGCTACGTCGAGGTGACTGGAATCGGAGCACGCTTCATCCTACAGTCCTCAACGCTCGTGTGTAACGGCCCATCTTCTCAGACCAGACCGCTTGTGCTTGTTGGGGCGAAAGCTCGCGCAATCTTCATTGCCGTCAAGTTCCCCGGTAACCTCTATATGTTCCATGCGGATAACCCAGAGAAGGTGCGAACATTCTGTGAAGGCGAGGGTATCGTTAAGACAATCGCGTGTACATACGACATTGAATCGGGGGCTGGTAACATTCCAGTCCACCGCTCACTTAACCGATTCTACAATAACGGGTTCGAGCAGGACTTGGCTGGATGGGCGCTTAACGTTGGTGGCGACCCAGCACAGACGGCTACAATCGTCACGGATGATACCAACAGCGGTGGTAAGGCGGTTAAGGTTGCCTCTCTGGATGGTAAGAGTGTATTCCTTACCCAGAATGTCAGAGTGTCTTCTGGAGAGGAGTTTGCATCGTTCGTGGCCTACAAGGTCAATAAGGCGGCATCCGGCTCAACACCGGGTAACCTGACAGTAACCTTTAAGTCCGAGAATGGTACCACTATCGGTACAGGCTCGACGTCTAACTTCTCGAACACTGTCGGGGCGTGGCAGCAAGGTGGCCTGTTCTGCCGAGGCGTTGCCCCAGTAGGTGCTGTATCCGCTGAGATATCTCTCCGTGTTCGTGATGGTGCTGAGGTTATCCTTGATGACGTTATCGTAAACTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
936e51db3704be67ffca5447bdf086e48f29dacf0266df0f98be5d47bd862dfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50