Protein

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Genbank accession
YP_010765943.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDYRDDSNDTAVISDTTWLGLSAVSEGTARISETVLYGLLVLHIDTAAVSDEAIDRPAHLLADQATISDAASDQLRARVLVVDTATAADRVTGTLRVLHVDDALVSDGVLDRVRGLTVDGATVADEAFGTRHAFTLVLDAARISDSTGQAASVLVEDAATVSDQATGALHGRVLLVDGASLADEVVDAHQAVQALLVDGASIAALVLDHLAARDLVSDAVVIEDITVGGDQDGGQAWTANVDSWAMSRYAPYTFRSLAVIDGRLYGIADDGVYALDGDSQPVAGRIATGKLDIGQGALVHPHSAYLEYALDADGTVAMDVTTTQSGSAATYSYPLESEPADELTNGRFKFGRGLRGRHFAFTLRLTGRHGYINDLSVESAPTNRRV
Physico‐chemical
properties
protein length:387 AA
molecular weight: 40619,42020 Da
isoelectric point:4,43648
aromaticity:0,05426
hydropathy:0,05168

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010765943.1
1 387
Domain Start End Length (AA) Confidence
N-terminal 1 334 334 0,9198
Central domain 335 376 43 0,0022
C-terminal 377 387 10 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-334
Central
335-376
C-terminal
377-387

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LKA5
[NCBI] 		1327940 Uroviricota > Caudoviricetes > Hollowayvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010765943.1 [NCBI]
Genbank nucleotide accession
NC_073675 [NCBI]
CDS location
range 42364 -> 43527
strand +
CDS
ATGAGTGACTACCGCGACGACTCCAACGACACGGCGGTAATCAGCGACACGACCTGGCTGGGGTTGTCGGCCGTCAGCGAAGGCACCGCGCGCATCAGCGAGACGGTGCTGTACGGGCTGCTGGTACTGCACATCGATACGGCGGCGGTGTCGGATGAGGCTATCGACCGACCGGCGCACCTGCTGGCGGATCAGGCAACCATCAGCGACGCGGCGAGCGACCAGCTCCGCGCCAGGGTGCTGGTGGTCGATACGGCCACCGCGGCGGATCGCGTCACCGGCACTCTTCGTGTCCTGCACGTCGATGACGCCCTGGTGTCGGATGGGGTGCTGGATCGCGTGCGCGGCCTGACGGTGGACGGTGCCACGGTGGCCGACGAAGCATTCGGCACCCGTCATGCGTTCACCCTGGTGCTGGATGCCGCGCGCATCAGCGACAGCACTGGCCAGGCCGCCAGTGTCCTGGTCGAGGACGCCGCCACCGTCAGCGATCAGGCAACTGGGGCGCTGCACGGTCGCGTACTGCTGGTGGATGGGGCGTCCCTCGCCGACGAGGTGGTGGACGCGCATCAGGCCGTGCAGGCGCTGCTGGTGGACGGGGCATCCATTGCCGCGCTGGTGCTGGACCATCTGGCGGCGCGCGACCTGGTATCGGATGCCGTGGTGATCGAGGACATCACCGTGGGGGGCGACCAGGACGGCGGCCAGGCTTGGACCGCAAACGTCGATAGTTGGGCGATGAGCCGCTACGCGCCGTATACCTTCCGGTCGCTTGCTGTGATCGACGGTCGGCTGTACGGCATCGCCGATGACGGCGTTTATGCGCTGGACGGTGACAGCCAGCCGGTGGCCGGCAGAATCGCGACCGGGAAACTGGACATCGGCCAGGGCGCGCTGGTGCATCCTCATAGCGCCTATCTGGAGTATGCACTGGACGCTGATGGCACGGTGGCCATGGATGTGACCACCACGCAAAGCGGCAGCGCAGCGACCTACAGCTACCCGCTGGAGAGCGAGCCTGCAGACGAGTTGACCAATGGGCGCTTCAAGTTCGGTCGGGGCCTGCGCGGCAGGCACTTTGCCTTCACGCTGCGCCTGACCGGTCGGCACGGCTATATCAATGACCTGAGCGTCGAATCGGCGCCGACCAACAGGAGAGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
70e7b721b0470a6a805c7ca612d4aea7a81b678fd0e02dcfaa7b1ad5b83cd2b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of F116-like bacteriophages Lammens,E.A. and Lavigne,R. 2020-10-20 — GenBank