Protein

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Genbank accession
QPX63083.1 [GenBank]
Protein name
putative baseplate puncturing device
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MPPVTRLGDIALGHSCYPPSPTIEASSNVFANSIAVHRLGDKIQPHACPGTPPHGRNSSSGSTSVFTNSKATCGIGDAVNCGGIIAQGSNNVFRG
Physico‐chemical
properties
protein length:95 AA
molecular weight: 9630,66350 Da
isoelectric point:8,49431
aromaticity:0,04211
hydropathy:-0,16421

Domains

Domains [InterPro]
cd14737
STR
2–95
cd14737
G3DSA:2.60.200.60
STR
3–94
G3DSA:2.60.200.60
IPR008727
STR
13–86
IPR008727
QPX63083.1
1 95
Architecture
STR
STR 2-95
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX63083.1
1 95
Domain Start End Length (AA) Confidence
N-terminal 1 56 56 0,1695
Central domain 57 84 29 0,0037
C-terminal 85 95 10 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-56
Central
57-84
C-terminal
85-95

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage F336
[NCBI] 		2794361 Uroviricota > Caudoviricetes > Connertonviridae > Fletchervirus F336 >
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX63083.1 [NCBI]
Genbank nucleotide accession
MT863715 [NCBI]
CDS location
range 86464 -> 86751
strand -
CDS
ATGCCACCAGTAACTAGATTAGGAGATATAGCATTAGGACATAGTTGTTATCCACCTTCACCTACAATAGAAGCAAGTTCTAATGTTTTTGCAAATTCAATAGCTGTTCATAGATTAGGTGATAAAATACAACCACACGCATGCCCTGGTACACCACCGCATGGTAGAAATAGTTCAAGTGGTAGCACAAGTGTTTTCACAAATTCAAAAGCTACTTGTGGTATAGGGGATGCTGTTAATTGTGGAGGTATAATCGCTCAAGGGAGTAATAATGTTTTTAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
947f7dbf6403b3667333c45cefbf685faef309e5d5e9820b855f90e4576e2313
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50