Protein

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Genbank accession
QDH94244.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MHLPNGSQIFIESTRAAEKEVTAITNAKEPVASISDTEGLAKGDIVIVVASTWGKMLDRVLRIKDVQENQSVTLDGIDTTDTNVFPAGATASIAKITAWTEIPCVQDLSQDGGEQQFYTYQCLSDDQEQQIPTYKSAVSMTYTFAHEYDNAIYPLLRKADESGEVTALRMYVPKAKEMRMWAGVLSFNEIPQTAVNEMETVSISCSLKGRFTFLPATQG
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24102,92230 Da
isoelectric point:4,63422
aromaticity:0,07763
hydropathy:-0,22146

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
G3DSA:4.10.410.40
STR
77–213
G3DSA:4.10.410.40
QDH94244.1
1 219
Architecture
ATT
TAS
STR
ATT 1-50 | TAS 51-76 | STR 77-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_PHB17
[NCBI] 		2591407 Uroviricota > Caudoviricetes > Drexlerviridae > Baihuvirus > Baihuvirus PHB17
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH94244.1 [NCBI]
Genbank nucleotide accession
MN090155.1 [NCBI]
CDS location
range 18363 -> 19022
strand +
CDS
ATGCACCTTCCTAACGGTTCACAAATTTTTATTGAAAGCACGCGAGCGGCAGAAAAAGAAGTAACTGCCATTACCAATGCAAAGGAACCAGTTGCAAGCATTTCAGACACCGAAGGTCTGGCAAAGGGCGATATTGTGATCGTTGTTGCTTCCACCTGGGGAAAGATGCTTGATCGCGTTCTACGAATCAAAGATGTACAGGAAAACCAGAGCGTAACTCTTGATGGTATCGACACAACAGATACTAACGTTTTTCCGGCTGGCGCAACTGCAAGCATTGCGAAAATCACCGCGTGGACTGAGATCCCATGTGTTCAGGATCTTTCGCAGGACGGCGGCGAACAACAGTTTTACACTTACCAGTGTTTGTCCGACGATCAGGAGCAGCAGATCCCGACCTACAAGAGCGCTGTTTCTATGACTTACACTTTTGCGCACGAATACGACAACGCAATTTACCCGCTGTTGCGTAAAGCCGATGAATCAGGCGAAGTAACCGCGTTGCGTATGTACGTACCGAAAGCAAAAGAAATGCGCATGTGGGCTGGTGTTCTCTCTTTCAACGAGATCCCACAAACCGCAGTTAACGAGATGGAAACCGTTTCCATCTCTTGCTCCCTTAAAGGGCGCTTTACTTTCCTTCCTGCAACGCAGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28139c1b95e8bf3f03fe7b96d64a49f60a2849bca5f713d132f725d9a3f7f5c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the virus isoalte vB_EcoS_PHB17 infecting Shiga toxin-producing Escherichia Chen,Y., Qian,P., Song,J. and Li,X. 2019-09-17 — GenBank