Protein

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Genbank accession
XRX09272.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSMLPPGGFASRPTFPYTLDQYTNGAPFTYRDGMTFLRRVEALVAYLNKDLIPWIDEGYEKYVTAFNNALTDIREYMEKQELIIDGKVTEMIELVANTTAALNDLLENANEEMAAKLLAAGVARDAAIAAADLSERWAGASKANQDQNVKELLQDNTSLTWIQLKALVNKSFVGLDKVNNTADVDKPVSTAQKTYIDSTSFGAAAMNALRGRALVTFGHSFMAGSGIVSPNKWAEQFAALVGLSYPEENMRAVGGAAAEEVGVRSAAADSSRRFRIGESTAISMTEGLINTARRTGANEAARRGALNAMRTVALVSTAKAYTPANSGRFNYVGAFNDTQLANVIMSATAKTIPSGAADNDRYVEFAMPAPVVYVMTISQAEGDPGCNVRITNNTGGGTIETFGNVNTAAADAPNRVNVPIRIEARIGDTIRVYKTGAGAMTFDGIIVPSDNPRPVLFMKEPYLADYSLSTAYPMGSDSVFNYFNAVLDSVKTEFPSAIVANPNTSGKWDKNTMIQADGVHPNLAGSAALAEIMYDAVKAQLPANIIATALRGTL
Physico‐chemical
properties
protein length:554 AA
molecular weight: 59258,24460 Da
isoelectric point:5,12372
aromaticity:0,07942
hydropathy:-0,09928

Domains

Domains [InterPro]
DC_2082
ATT
7–142
DC_2082 DC_0836 SSF52266
Coil
Unmapped
92–112
Coil SSF52266
SSF52266
STR
470–542
SSF52266
XRX09272.1
1 554
Architecture
ATT
STR
ATT 7-142 | STR 153-542 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Curtobacterium phage Thatch
[NCBI] 		3399732 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX09272.1 [NCBI]
Genbank nucleotide accession
PQ868963 [NCBI]
CDS location
range 10258 -> 11922
strand +
CDS
ATGAGCATGCTTCCCCCGGGTGGTTTCGCCTCGCGACCCACGTTCCCGTATACCCTTGATCAGTACACCAACGGCGCGCCGTTCACATACCGCGACGGAATGACGTTTCTTCGACGCGTTGAGGCTCTTGTCGCTTATCTGAATAAAGATCTTATTCCGTGGATTGATGAGGGCTACGAAAAGTACGTGACCGCGTTCAATAACGCTCTCACTGACATTCGCGAGTACATGGAAAAGCAAGAGCTGATCATTGATGGTAAAGTCACCGAAATGATTGAGCTTGTCGCCAACACGACGGCGGCGCTGAACGATCTTCTTGAAAACGCTAACGAGGAAATGGCCGCAAAGCTTCTGGCGGCGGGTGTCGCTCGCGACGCGGCTATTGCGGCGGCCGACCTTTCCGAGCGGTGGGCGGGCGCATCAAAGGCGAATCAGGACCAGAACGTTAAGGAGCTGCTACAGGATAATACCTCCCTGACGTGGATTCAGCTTAAGGCCCTCGTTAATAAGTCTTTCGTCGGGCTTGACAAGGTGAACAACACCGCCGACGTTGACAAGCCGGTTTCGACCGCCCAGAAGACGTACATTGATTCGACCAGCTTTGGTGCAGCCGCAATGAATGCTCTTCGAGGTCGCGCACTTGTGACCTTTGGCCACTCGTTTATGGCTGGCTCTGGGATTGTTAGCCCGAATAAGTGGGCTGAGCAGTTTGCCGCACTTGTCGGTCTTTCCTACCCGGAAGAGAACATGCGGGCGGTTGGCGGTGCCGCGGCGGAAGAGGTTGGGGTGCGGTCGGCAGCGGCTGACTCTTCCCGGCGATTCCGCATTGGCGAGTCCACGGCCATTTCCATGACCGAGGGACTTATCAACACTGCACGCCGTACAGGCGCGAATGAGGCCGCACGACGGGGCGCACTGAACGCAATGCGAACCGTTGCACTCGTGAGCACGGCTAAGGCGTACACGCCCGCGAATTCCGGTCGCTTTAACTACGTTGGCGCGTTTAACGATACTCAGCTTGCTAATGTGATCATGTCGGCAACGGCGAAGACAATTCCGAGTGGTGCGGCCGACAATGACCGTTATGTTGAATTTGCCATGCCCGCGCCGGTCGTGTATGTCATGACGATTTCTCAGGCAGAAGGCGACCCGGGGTGTAATGTTCGTATCACCAACAACACCGGCGGCGGTACGATCGAAACCTTTGGCAACGTCAATACCGCGGCGGCTGACGCTCCTAACCGGGTAAATGTTCCGATCCGCATTGAGGCTCGAATCGGTGACACGATTCGCGTGTACAAGACGGGCGCGGGTGCCATGACGTTTGATGGTATTATCGTTCCGTCGGACAACCCGCGGCCCGTGCTCTTTATGAAAGAGCCGTATCTTGCGGATTACAGTCTGAGCACTGCATACCCGATGGGTAGCGATTCGGTGTTCAACTACTTTAACGCCGTTCTGGATAGCGTTAAGACTGAATTTCCTTCTGCTATTGTCGCAAACCCGAACACGTCTGGTAAGTGGGATAAGAACACCATGATTCAGGCAGACGGGGTGCACCCGAACCTTGCCGGTTCGGCGGCACTGGCAGAAATCATGTATGATGCGGTGAAGGCTCAGCTTCCCGCGAACATCATTGCTACAGCATTGCGAGGCACACTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d340667f7e603cb8ce75165db88b9466f9d19f0fb2b206fd7fcfc9ce22998289
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7035
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50