Protein

View in Explore
Genbank accession
WFG41953.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGIAKGGQIDGNVTINGLLRLNGDYVQTGGMTINGPIGSTDGVTAKVFRSTQGSFYARATNDTANAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKSFGQYDSQSLVNYVYPGTGETNGVNYLRKVRAKSGGTIYHEIVTAQTGLADEVSWWTGNIPLFKLYGIRNDGRMIIRNSLAIGTVTQGFPSSDYGNVGALGNIFLALGDNGTGLVYRKTGVFDFVGSGLSLASITPDSFRSTRKAIFGRSEDQGTTWIMPGTNAAFLSVQTQADENTAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKLVTGSNNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTIDGTKQILWEGGKRAGQNKSYVTVKAWGNSFNTSGDRSRETVFEVSDGQGYHFYSQRVAPGSGSTVGPIQFRVNGGLLTSGSIVASGSITTESSLNVNNGLSVNGQAKFGGTADALRIWNAEYGAIFRRSEDKLYIIPTPQNVGESGGISNLRPFYIALSDGKVTMRHSVTLGDDGRGGNMITVDNDNKLVVVTSHSRISPNYRMQIGQSAYIDAECTDAVRPAGAGSFASQNNENVRAPFYMNIDRTDTSTYVPIVKQRYVQNNSCYSIGTLINGGNFRVHYHEGGDGGSTGAIIKDLGWEFNKNGDFYSPGKLGAGNVRIGTDGNITGGSLPNFANLNSTLDRKVNTRMVSYSGTGGWYKLATVTMPQSTSTVTFEIAGGNGYNVNTPHQCVTSKIVLRTSNNNPKGINAVVWSMDTDQGIKNVATVNTSGDVYDIYVNVGTYAQALAVSYYATPNATINQVFATDQPGATETAVELPETAIQGQVASVLNNLQKTPNGSKRYVAESEIAINNQTGIRITSNSDRSGSNSVLFRNDGGNFYILLTDKNSSDGDNKATEGDWNGKRPFSIDMTAGTVRLGENTSFDKDITINGNINSRVKAAGQWSVSFSAISDVTRDNSAFLANTGGISKTSQAYYPLFSGYSFLTDAGYRQSFEFGWLGVSGTWRQGIIRMRGDNPSGQQARWTFDMDGTFYAPILSCGSARAFGVNTSNGWGGNSIAIGDSDTGFRQVGDGLLEAWANNVKVVRFTSSEVYSEKNVNAPNVYIRSDVRLKSNFKPIKNALERVEQLDGLIYDKAEYIGGEPVQTEAGIIAQTLQDVLPEAVHETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1327 AA
molecular weight: 142352,33500 Da
isoelectric point:7,95058
aromaticity:0,08817
hydropathy:-0,34288

Domains

Domains [InterPro]
DC_1954
STR
1–1326
DC_1954
IPR048390
ATT
491–617
IPR048390 IPR030392
IPR030392
CHP
1229–1286
IPR030392 Coil
WFG41953.1
1 1327
Architecture
STR
ATT
STR
STR 1-490 | ATT 491-617 | STR 618-1326 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WFG41953.1
1 1327
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,1544
Central domain 218 430 214 0,6586
C-terminal 431 1327 896 0,6063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-430
C-terminal
431-1327

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ADUt
[NCBI] 		3032370 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WFG41953.1 [NCBI]
Genbank nucleotide accession
OQ466432.1 [NCBI]
CDS location
range 71901 -> 75884
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATTCAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGTCAAATTGATGGAAATGTAACTATCAATGGTCTTTTGAGGTTAAACGGCGATTATGTACAAACAGGTGGAATGACTATAAATGGACCTATTGGTTCTACTGATGGCGTAACTGCAAAAGTTTTCAGATCTACACAGGGTTCATTTTATGCAAGAGCAACAAACGATACTGCAAATGCCCATCTTTGGTTTGAAAATACAAATGGCTCAGAACGTGGCGTTTTATATTCAAAACCGCAGTCTGAAAATGAAGGCGTAATTACAATGCGTGTTCGTCAAGGAACCGCTGCGGGAGCTCAAAATTCAGAATTTCATTTCATTTCTACCGATGGTGGTATCTTCCAGGCACGCAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAATCATTTGGACAATACGATTCACAATCTTTGGTTAACTATGTTTATCCTGGAACCGGTGAAACAAATGGCGTAAACTATCTTCGTAAAGTTCGCGCTAAGTCCGGTGGTACAATTTATCATGAAATTGTTACTGCCCAAACAGGCCTGGCTGATGAAGTTTCTTGGTGGACTGGTAATATACCGTTATTTAAACTATATGGTATTCGTAACGACGGTAGAATGATTATTCGCAATAGCTTGGCCATTGGTACTGTGACGCAAGGGTTTCCGTCAAGCGATTATGGAAATGTTGGGGCACTAGGAAATATATTTCTTGCTTTAGGTGATAATGGAACTGGTCTAGTTTATAGAAAAACCGGCGTATTTGATTTTGTTGGTTCTGGTTTATCTTTGGCATCTATTACACCTGATAGTTTCCGTAGTACTCGCAAAGCAATATTTGGACGCTCAGAAGACCAAGGTACAACATGGATTATGCCTGGAACGAACGCTGCATTTTTATCAGTTCAAACACAAGCTGATGAAAACACTGCTGGAGACGGTCAGACACATATTGGCTATAACTCAGGCGGAAAAATGAACCACTATTTCCGTGGTAAAGGCAAAACTAATATTAATACCCAAGAAGGCATGGAAGTTAACCCTGGTATTCTTAAACTAGTAACTGGCTCTAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAACGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAATTGACGGCACTAAGCAAATTTTGTGGGAAGGTGGTAAGCGTGCTGGGCAGAATAAAAGCTATGTAACTGTTAAAGCGTGGGGTAATTCATTTAACACATCTGGAGATCGTTCCCGTGAAACAGTTTTTGAAGTATCAGATGGGCAAGGTTACCATTTTTATTCTCAGCGAGTTGCTCCCGGATCAGGTTCTACTGTCGGACCTATTCAATTTCGAGTTAATGGTGGTTTATTAACTTCAGGTAGTATTGTTGCTTCTGGTTCTATTACAACTGAATCTTCTTTAAATGTTAATAATGGATTATCTGTAAACGGACAAGCTAAATTTGGTGGAACGGCTGATGCATTAAGAATTTGGAATGCTGAATACGGTGCTATTTTCCGACGTTCTGAAGATAAGCTTTATATTATTCCAACTCCACAGAATGTTGGTGAATCAGGTGGTATTTCTAATTTACGCCCGTTCTATATTGCATTAAGTGATGGTAAAGTCACCATGCGTCATTCTGTCACATTAGGCGATGATGGCAGAGGCGGCAATATGATTACTGTAGACAATGATAACAAACTTGTTGTTGTTACTAGTCATAGTCGTATTTCTCCTAATTACCGTATGCAGATAGGTCAGTCGGCATACATTGATGCAGAATGTACTGATGCTGTTCGCCCAGCCGGTGCAGGTTCATTTGCTTCACAAAATAATGAAAACGTTCGTGCTCCGTTCTACATGAATATAGATAGAACCGATACAAGCACTTATGTTCCTATTGTGAAACAAAGATACGTTCAAAATAATAGTTGCTATTCTATTGGTACTTTAATTAATGGTGGTAACTTTAGAGTTCATTATCACGAAGGTGGCGATGGCGGTTCTACTGGCGCAATTATAAAGGATTTAGGTTGGGAATTTAATAAAAATGGTGATTTTTACTCTCCTGGTAAATTAGGTGCTGGTAATGTTCGTATTGGTACTGATGGTAATATCACGGGTGGTTCATTACCTAACTTTGCTAACTTGAACTCGACATTAGATCGTAAAGTCAATACCCGAATGGTTTCTTATTCAGGTACTGGCGGTTGGTACAAATTAGCAACGGTGACAATGCCACAATCCACTTCAACCGTCACATTCGAAATTGCTGGTGGTAATGGCTATAATGTCAACACCCCACACCAATGCGTTACTTCGAAAATTGTTTTAAGAACTTCGAACAATAACCCGAAAGGTATTAACGCTGTTGTTTGGTCGATGGATACCGATCAGGGTATTAAGAATGTTGCAACGGTTAATACATCAGGCGATGTTTATGACATCTATGTAAACGTTGGTACTTATGCTCAAGCGCTAGCAGTTTCTTATTATGCTACTCCTAATGCTACCATTAACCAGGTATTTGCAACGGACCAACCGGGTGCAACAGAAACTGCGGTTGAACTTCCTGAGACGGCTATTCAAGGACAGGTTGCTAGTGTTCTTAACAACTTGCAAAAAACGCCTAATGGTTCTAAGCGTTATGTAGCAGAGTCGGAAATTGCTATTAATAACCAAACCGGTATTCGTATTACGAGTAATTCTGATAGATCAGGTTCTAATTCCGTTTTATTTCGAAATGACGGTGGAAACTTCTATATTTTACTGACTGACAAAAACTCTTCAGACGGCGATAATAAAGCAACTGAAGGCGATTGGAATGGAAAACGACCGTTTTCAATCGATATGACTGCTGGTACTGTTCGTCTTGGCGAAAATACTTCTTTTGATAAAGATATTACTATTAATGGAAACATTAATTCACGAGTTAAAGCTGCCGGACAATGGAGTGTTAGCTTTTCTGCTATTTCAGATGTGACTCGCGACAATTCTGCATTCTTAGCGAATACGGGTGGCATTTCCAAGACAAGTCAAGCTTATTACCCGCTATTTTCTGGATACAGTTTTTTAACTGACGCGGGCTATCGTCAATCATTTGAATTTGGATGGTTAGGTGTTTCTGGTACTTGGCGTCAAGGTATTATTCGCATGCGTGGCGACAACCCATCGGGGCAACAGGCTCGTTGGACTTTTGATATGGACGGAACATTTTATGCTCCTATACTATCATGCGGATCTGCGAGAGCATTTGGTGTAAATACCTCCAACGGTTGGGGTGGTAACTCCATTGCAATTGGTGATAGTGATACTGGTTTTAGACAAGTAGGCGATGGGCTTTTAGAAGCGTGGGCGAACAACGTTAAAGTTGTTAGATTCACCTCAAGTGAAGTTTATTCCGAGAAAAACGTCAATGCTCCTAACGTTTATATTCGTTCTGATGTTCGCTTGAAATCTAATTTTAAACCTATTAAAAATGCGCTCGAAAGGGTTGAGCAACTTGATGGTTTAATCTATGACAAAGCTGAATATATAGGCGGTGAACCTGTTCAAACCGAAGCGGGTATTATAGCTCAAACGTTGCAAGACGTTTTACCAGAAGCCGTCCATGAAACAGAAGATAGCAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTGGTTGAAGCTGTGAAAACACTTTCTTCTCGTGTAAAAGAACTCGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee7a546e5d000e83edd87e4eb50704a578dda3d03b28d4fbc8c5e716dac61596
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4997
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Extracted environmental DNA transformation resulted in an active phage in Escherichia coli Salih,H., Karaynir,A. and Bozdogan,B. 2023-10-13 — GenBank