Protein

View in Explore
Genbank accession
USN15488.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDFHDVLFPPDISYGSSGGPKFKTSIWTADSGFEARVSHWPKTRAEYDVSHGVKSEAQAEALTAFFMNRRGRAFGFRFKDFNDYKLENQTLGAGDYATSVFQLSKDYTSIGPNGETYVTRRLLDKIEWGSEKGVQIDGATITKSVSSARYYSLGYSTGKLTLNTPMWGGRYAGTTPSTRINWRSGEFTPDYDSYTQGSVTRSVIFYASAIGKAYVKGGFFASLGAPGLMRIDLPTAKVDAKVSPAMMSLPNGDGLDYIGAVSPSGMIYCTNYTSNTTKMHKVDGVTLQYVSSWGEESIWPGDEKGVGAPWSPGCVSANEQYLLWPDLWGYIDIHSTDTMVRVARLGRFGGITSQQYIAATPYGEAGFAFVYERPSGGLIHGCGLRIWVAGASWVAETWGAPTARPTAVYGDKKTGGVLVFWRGEERSPAYVYDGYDNWAGLYLPDEGRWAWQRRMPPNFQSIKVLSNCQTVLDGELFWIRDTQGFGSRLWRMDTATGELESRAAPYTNEYQVYDPQRKIIGGLGGNSYINPPAVFSTELNNVAYTPPEKLTLASVEYHVGVRFDTDHLNMKHEFWTYRSWESIPLVEVRDWTDLDLD
Physico‐chemical
properties
protein length:598 AA
molecular weight: 66532,58770 Da
isoelectric point:5,72485
aromaticity:0,13712
hydropathy:-0,38746

Domains

Domains [InterPro]
IPR011740
STR
5–167
IPR011740 SSF63825
IPR011740
STR
5–165
IPR011740 DC_1110
USN15488.1
1 598
Architecture
STR
STR 5-598
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USN15488.1
1 598
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,6302
Central domain 183 405 224 0,6986
C-terminal 406 598 192 0,2280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-405
C-terminal
406-598

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevundimonas phage vB_BpoS-Kikimora
[NCBI] 		2948601 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Kikimoravirus kikimora >
Host Brevundimonas pondensis
[NCBI] 		2774189 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USN15488.1 [NCBI]
Genbank nucleotide accession
ON529857 [NCBI]
CDS location
range 207663 -> 209459
strand -
CDS
ATGTCCGATTTTCACGACGTCCTTTTTCCGCCTGACATTTCTTATGGTTCGTCCGGCGGGCCGAAGTTCAAGACGTCTATCTGGACGGCGGACTCGGGTTTTGAGGCGCGGGTGTCGCATTGGCCGAAGACCCGCGCTGAGTATGATGTCAGTCACGGTGTGAAGTCTGAGGCGCAAGCTGAAGCGCTGACCGCGTTCTTTATGAATCGGCGTGGACGGGCCTTTGGGTTCCGCTTTAAGGACTTCAACGACTACAAGCTGGAGAACCAGACGCTGGGTGCCGGGGACTACGCCACCAGTGTTTTCCAGCTAAGCAAAGACTATACGTCGATCGGTCCCAACGGAGAGACCTACGTCACCCGCCGGCTTCTCGACAAAATCGAGTGGGGTTCCGAAAAGGGCGTTCAGATTGATGGCGCGACCATCACCAAATCCGTGTCGTCGGCGCGCTATTACAGCCTGGGCTATTCCACGGGCAAGCTGACGCTGAACACGCCCATGTGGGGAGGGCGCTACGCGGGGACGACGCCGTCGACGCGGATCAACTGGCGTTCAGGCGAATTCACGCCAGATTACGATTCCTACACCCAGGGGTCGGTGACACGCTCGGTGATTTTCTACGCTTCAGCCATCGGAAAGGCCTATGTCAAAGGAGGTTTTTTCGCCTCCTTGGGTGCGCCGGGGTTGATGCGCATCGACTTGCCGACCGCCAAAGTTGACGCGAAGGTTTCGCCGGCGATGATGTCTTTGCCGAATGGGGATGGCCTAGATTACATCGGAGCTGTCAGTCCGAGCGGCATGATCTACTGCACAAACTACACGTCCAACACCACCAAGATGCACAAGGTGGATGGGGTCACGTTGCAGTACGTGTCCAGTTGGGGAGAAGAATCGATCTGGCCTGGTGATGAGAAGGGGGTGGGCGCGCCTTGGTCGCCAGGGTGCGTCTCGGCGAACGAGCAGTACCTTCTGTGGCCCGACCTGTGGGGCTACATCGATATTCACTCTACCGACACCATGGTGCGGGTGGCGCGGCTGGGTCGTTTCGGCGGAATCACGTCGCAACAGTATATCGCCGCTACGCCATACGGTGAAGCCGGTTTCGCCTTTGTGTATGAGCGGCCTTCGGGCGGCTTGATTCATGGCTGTGGTCTGCGGATTTGGGTGGCGGGCGCCAGCTGGGTTGCGGAAACCTGGGGCGCTCCCACCGCCCGACCGACGGCGGTCTATGGAGATAAGAAGACCGGCGGCGTTCTCGTCTTCTGGCGTGGGGAGGAGCGATCCCCGGCATACGTCTACGACGGCTACGACAACTGGGCGGGCTTGTACCTGCCTGACGAGGGACGATGGGCCTGGCAGAGGCGTATGCCGCCGAATTTCCAGAGCATCAAGGTGTTGTCGAATTGTCAGACGGTCCTGGATGGCGAGTTGTTCTGGATTCGCGACACCCAGGGATTCGGGTCGAGGTTGTGGAGAATGGACACTGCCACAGGCGAACTAGAATCTCGTGCCGCACCTTATACCAACGAATATCAGGTTTATGATCCGCAGAGAAAGATCATTGGCGGTCTCGGGGGCAACTCTTACATCAACCCCCCTGCGGTATTCTCGACTGAATTGAATAATGTCGCTTACACCCCTCCTGAAAAACTGACGCTTGCGAGCGTAGAATACCACGTTGGTGTCCGTTTCGACACGGATCACCTCAATATGAAACACGAGTTCTGGACCTATCGATCCTGGGAATCCATCCCGTTGGTCGAAGTGCGTGACTGGACCGATCTGGACCTAGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f26fe09484e410b41b8d66dcf49b3ef24a7d82c3549c9f63e31c7a3c42a239ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50