Protein

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Genbank accession
YP_010719890.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTSRRPLVVIGGRIQELPAGDDVAAVVNDPEFVYDTVADILQQGTNITLTFNDTTNKITIACVVDAEYIRDTIGAALVQGTGTILSVNDSLNTITYSVDPEYVRDVIATALSASNGVALTIDDAGDSMSLQADPEYFRDLMGMTLVQGPGVVISVNDAGNTITISADGSTTIPFIYVPAVFYPGTLKTANIIMLRHAIVSDCTLPANCAGSAGGGEADATSTSVYKIQKSTAALPDTFTDIGAITYSSGTHIPTFSTAGGVDINFAVGDTLRVVSPDVPDTTLSDTNFTILMNRSS
Physico‐chemical
properties
protein length:296 AA
molecular weight: 30878,25200 Da
isoelectric point:4,05037
aromaticity:0,06081
hydropathy:0,21486

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphingomonas phage vB_StuS_MMDA13
[NCBI] 		2686378 Uroviricota > Caudoviricetes > Queuovirinae > Torvergatavirus MMDA13 >
Host Sphingomonas turrisvirgatae
[NCBI] 		1888892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Sphingomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010719890.1 [NCBI]
Genbank nucleotide accession
NC_072503.1 [NCBI]
CDS location
range 21856 -> 22746
strand +
CDS
ATGACGAGTCGTCGCCCTCTTGTTGTCATCGGTGGACGTATCCAGGAGCTTCCGGCTGGGGATGACGTCGCAGCGGTCGTGAACGATCCAGAGTTCGTTTATGATACTGTTGCGGATATCCTGCAACAGGGAACAAACATCACTCTGACGTTCAACGATACAACAAACAAGATTACGATTGCCTGCGTCGTTGACGCCGAGTATATTCGAGATACGATTGGCGCAGCGCTGGTGCAGGGCACCGGCACAATCCTGTCTGTTAACGATTCCTTGAACACGATTACATATTCGGTTGACCCTGAGTATGTTCGGGATGTCATTGCGACTGCGCTGTCAGCGTCCAATGGTGTCGCGCTCACTATTGACGATGCAGGCGACTCGATGTCGTTGCAAGCGGATCCTGAATACTTCCGCGACCTGATGGGAATGACACTGGTGCAAGGCCCTGGTGTGGTCATCAGTGTTAATGATGCTGGTAATACCATCACCATCAGCGCGGATGGATCTACAACGATTCCGTTTATCTATGTTCCGGCGGTATTCTATCCCGGCACATTGAAGACAGCCAACATCATCATGTTGCGCCATGCCATTGTATCCGATTGCACTCTGCCGGCGAATTGCGCGGGGTCCGCAGGGGGTGGTGAAGCGGATGCGACATCAACGTCAGTCTATAAGATCCAGAAATCAACCGCTGCTCTTCCTGATACCTTCACTGATATTGGTGCGATCACCTATAGCAGCGGGACGCATATTCCAACCTTCAGCACTGCGGGCGGGGTTGACATTAACTTTGCGGTCGGGGATACTTTGCGCGTCGTAAGCCCCGACGTTCCTGATACGACGCTGTCGGATACCAACTTTACGATCTTGATGAATCGGAGCTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
141abac225cc78b7a91a85ef685baf3c73b0b5c9bcd92c4119b39da56981aab7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8677
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of vB_StuS_MMDA13, a Newly Discovered Bacteriophage Infecting the Agar-Degrading Species Sphingomonas turrisvirgatae Marmo,P., Thaller,M.C., Di Lallo,G., Henrici De Angelis,L., Poerio,N., De Santis,F., Fraziano,M., Migliore,L. and D'Andrea,M.M. 2020 32824138 GenBank