Protein

View in Explore
Genbank accession
QHR68771.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAKGYSLDALVNEHYIKDAVGLGDSNINDKWGKDNVGTFFQNIAAYATVENGYPAGASAGNLEVLLTSAGTLGNCIQRYTNFNDLRMWMRSQKGGDGDRSWATWRELINANNIYNSIYPIGIVLQFDNATNPNNMFTGTVWEQITDGRSARAATGPEAGTTAGQIGSVGGSDTATIAVANLPGHTHGMQNHTHGIAAHSHTMDHTHTINHDHAAVASSSSGEHAHSVSGSTSSAGDHTHSIGGAVSVAAGGGATINQNQSGVNTRPAGAHTHSISGSTNSTGAHAHTVDIPYFTGTSGGPSVGWTGGAPLTTGGPSSNETTSTGDGTALNVCNSVHYYAFWKRTA
Physico‐chemical
properties
protein length:345 AA
molecular weight: 35620,15390 Da
isoelectric point:6,08617
aromaticity:0,06957
hydropathy:-0,38986

Domains

Domains [InterPro]
DC_0905
STR
6–345
DC_0905
cd19958
STR
37–108
cd19958 IPR053827
QHR68771.1
1 345
Architecture
STR
ATT
STR
STR 6-113 | ATT 114-240 | STR 241-345
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage flopper
[NCBI] 		2696397 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus flopper
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR68771.1 [NCBI]
Genbank nucleotide accession
MN850594 [NCBI]
CDS location
range 13281 -> 14318
strand -
CDS
ATGGCTAAAGGTTATTCTTTAGATGCGCTGGTTAACGAACACTACATTAAAGATGCAGTTGGTTTAGGTGACAGCAATATAAATGATAAGTGGGGCAAGGATAATGTAGGAACATTCTTCCAAAACATAGCTGCATATGCAACAGTTGAGAATGGGTATCCTGCTGGGGCCTCAGCAGGTAACTTGGAAGTGTTACTTACTAGTGCCGGTACTCTTGGGAATTGCATACAGAGATACACAAACTTTAACGATTTAAGGATGTGGATGCGTTCTCAAAAAGGAGGTGATGGTGACAGGTCATGGGCGACTTGGAGAGAGCTTATAAATGCAAACAACATTTATAACTCAATCTACCCAATCGGAATTGTTCTCCAGTTTGATAATGCCACTAACCCGAACAACATGTTCACTGGTACTGTGTGGGAACAAATCACCGATGGTCGCTCTGCCCGTGCTGCAACTGGCCCAGAAGCAGGCACAACTGCTGGCCAGATTGGTTCAGTAGGTGGGTCTGATACCGCCACCATTGCTGTAGCCAACCTACCAGGCCACACGCATGGGATGCAGAACCACACTCACGGTATTGCAGCCCACTCACACACGATGGACCACACTCACACCATCAACCACGACCATGCGGCAGTTGCATCAAGTTCATCTGGTGAACACGCTCACAGTGTAAGTGGAAGTACGTCATCTGCTGGGGACCACACTCACTCAATAGGTGGGGCTGTCTCTGTTGCTGCTGGCGGTGGTGCCACCATTAACCAAAACCAAAGTGGTGTAAACACTCGCCCTGCTGGTGCTCACACACATTCGATAAGCGGTTCTACCAACTCTACTGGCGCTCATGCACACACTGTGGACATTCCATACTTCACAGGTACAAGTGGTGGCCCTAGTGTAGGATGGACGGGAGGTGCACCGCTAACCACTGGTGGCCCTAGCAGCAATGAAACAACCTCAACTGGCGACGGGACTGCACTCAATGTATGTAACTCCGTACACTACTATGCCTTCTGGAAACGGACGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a651225752cf75f07d49c302fbf0881f3adcab3833550f0aa2ca9fad5dd556b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank