Protein

View in Explore
Genbank accession
XVC01975.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRVMKGTRDADFMPTMQTGKLTESTRKESTDMIPVFDVELGVWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11495,39520 Da
isoelectric point:9,34522
aromaticity:0,05882
hydropathy:-0,16373

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
XVC01975.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TOPO13
[NCBI] 		3425925 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVC01975.1 [NCBI]
Genbank nucleotide accession
PV658497.1 [NCBI]
CDS location
range 6135 -> 6443
strand +
CDS
ATGAAACTGACGACTGAACAAAAAGTAGCAATTCGTGAAATTTTGAAAACTAAATTGTCCATGGGTGTTTCAAACGTAGTTTTTGAAAAGTCTGATGGTACTATTCGTGTTATGAAAGGTACTCGTGATGCAGACTTTATGCCAACCATGCAAACTGGTAAATTGACGGAATCTACTAGGAAAGAATCTACTGACATGATTCCAGTATTTGATGTTGAACTTGGTGTATGGCGAGGTTTTTCTATTGACAAATTGATTTCCGTTAATGGTATGAAAGTTGAGCATTTGCTCCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3567a1965d5ce74ccc0e5e38122044e31580be17e8e623c73be772c293d2a528
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50