Protein

View in Explore

Genbank accession

QHJ74674.1 [GenBank]

Protein name

tail fiber

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect2

Probability 0,63

Protein sequence

MNFINLSSQQAPNDVDWAGLVNSGVQGVLIRLGHGIIRDPCASGHIAKAKQYGLYWHGYHTYEGVVNEPQFTIKNATELGLSTSQYYFVDLTKSSDPFNDYYALHATWLSQGYSTGLLISNDDYLSKFTDSEVTASGTLRWLISDTEPANYDVWQYSSEGMVGTSSAKVGLNFAKTDKLKYNLNTTLTGADINKDPYNPQTPVGGAYIGWGYDTTGLGGGKTIGYSTNGENFYALIGPNGLVVRKSDGNRIYGTIADQIDSAISANVIPAKSAADSAVAYANDAIKKSRVNSQAIDDINSAVSDAVSDAAVARSDGLRAWNAAQSNVNLIDLNYASASAAISSARTEAIAAADEAKSSASVAQAGVVAVKSDVAAVQADVTATRSDVAVAKSDIADTKTTLEQTASGLNSKISGVETSLADTTSALSDAKTALTSDVADAKKLANTAQATADNAVKSASSVADDLTAVASQAKANTNGITKVTSDVGLLQTTVANNTGDISTIQETAKQIQQSVSDNAGNITVAKQTADSAVAVASDAKSNATVAIQTASQASITAQNASGQAASAVITANGAMTTASDAKSNATVAVQTASGASLTATNANSDATVAKQTASEAKVQASNAESDFAQLSIRANKIEANVADNSGAIASVQQTANGLTTTVGNVDNRVKKIEDNTNWTTKTGTLDMDTLTTTQNIYYRDTNLKNADGEAGWAYIQVVSTGERVTQTVWHDRSSIQHTRTGAIDGSTYDWDAWNQSATNSQVAEVKQTVDGITTTVSNIQGDVSQLKVSASSASVALSDAAGNISNLQATAKSFSAALSDTNSNVASVTATASELETKYADAANDISQIKTDAKGMTQTISNAQGDIAKLKTRADGFDAEFATANGNISKLQTDATGTTQTLANTKSDVAVLQSRADGLDTKYANAAGDINTLKANASGISQTLTNSQGDISTLKSTVSGVQTTLTDAQGNISTLQSDVSGLKKTTSDNAGNISTLQATAKTLTSQMSGAQGDISTLKQTASDFSSKVSGMETSLSDANSKINGITSNGGGRNLLQGTGTASGDVAGGNGTFAQGAFNGYDAVKTNGCWSEHYLDLKSALGRTNAKAGDWYTISVYVKADKQIDTGSLDVYRALGNVDANTNDGHLDPILMPNKPITTQWQQYSWSFQINNVSLQRQNTRVEYNFDTGDNWIYWAGWMLENGTVSHDWSPAPEDTDAKITANTTAIEQNKQAIALKADQTTVDKTNGTVQQLQSQLQVQAGQIASKVSSSDLDAKGYATQTYTQTQIKQTSDSWNANLASVKDGLTQSYTNLSATVNGLTTTVGNVDDRVKKIEDNTNWTTKTGVLDMNTLTTTQNIYYRDTNLKNADGETGWAYIQVVSTGERVTQTVWNDRSSIQHTRTGAIDGSTYDWDAWNQSATNAQVTAIKQTVDGIQTQVYNSDGSSKITQLSNLIATKVSSDDFNNLSKSVNLQTLDSADINNMKTNGHYFVHNLANNPIGGWVYVDVTGNGNDRIRQDVYQDSGIGHKYRRLFGTYWTNWEEGATYTEINQLQDAINLRVTKGDLISQINLQAGTALIQSNKLVLDAGTTVITGEAFIPSAAISSISADKVTIGSSSLYNSDGTLNLVNSKDGTTSKITVTQGNVDFDGIEKNASVIHFASDNNTNAFTITPVGATVTPTLFFERFDQTPGHWLGFTRNETEHEGVMFHTWDDDGERFFVDCHARFDKNLRTLGTLSQGSWDGTTAKPEAGVLTIKNGNTIWSGSNFLAIGDNLSNSYTNVMAKSFSQQSTLSSKTNIEEVDPKDALDLVNRTDIRSYQYTSDVEQGKTKRYTSLILDDVHDVSQYYAPDEFANEERTGRDDGSAVGYLFLAVKELTRRIKNLEEKLNG

Physico‐chemical properties

protein length:	1887 AA
molecular weight:	200274,33510 Da
isoelectric point:	4,78689
aromaticity:	0,06624
hydropathy:	-0,41150

Domains

Domains [InterPro]

G3DSA:3.20.20.80
STR
1–184

G3DSA:3.20.20.80 DC_1672 Coil PTHR34707 cd19958 IPR030392

IPR017853
ATT
4–177

IPR017853 DC_2041 Coil G3DSA:1.20.5.340 DC_0469

SSF57997
STR
807–983

SSF57997

G3DSA:1.20.5.340
STR
814–898

G3DSA:1.20.5.340 DC_2057

DC_2041
STR
819–908

DC_2041

QHJ74674.1

1 1887

Architecture

ATT

STR

RBD

ATT 1-177 | STR 479-595 | STR 714-1234 | STR 1471-1540 | RBD 1541-1886 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.20.20.80	STR	G3DSA:3.20.20.80	1	184	Merged direct domain	G3DSA:3.20.20.80	Central	Low	Positional only	38 proteins / 38 hits
IPR017853	ATT	IPR017853	4	177	Merged direct domain	Glycoside hydrolase superfamily	N-terminal	Low	Positional only	5 proteins / 5 hits
DC_1672	STR	DC_1672	479	595	Novel HMM	DC_1672	Central	Low	Positional only	22 proteins / 22 hits
Coil	Unmapped	-	619	639	Coils	Coil	-	-	-	-
PTHR34707	Unmapped	-	677	1316	PANTHER	VIMENTIN-TYPE INTERMEDIATE FILAMENT-ASSOCIATED COILED-COIL PROTEIN	-	-	-	-
DC_2041	STR	DC_2041	714	830	Novel HMM	DC_2041	Central	Low	Positional only	25 proteins / 25 hits
SSF57997	STR	SSF57997	807	983	Merged direct domain	SSF57997	Central	Low	Positional only	14 proteins / 14 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	814	898	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
DC_2041	STR	DC_2041	819	908	Novel HMM	DC_2041	Central	Low	Positional only	25 proteins / 25 hits
Coil	Unmapped	-	831	851	Coils	Coil	-	-	-	-
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	899	988	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
DC_2057	STR	DC_2057	918	1234	Novel HMM	DC_2057	Central	Low	Positional only	53 proteins / 53 hits
cd19958	STR	DC_0464	1471	1540	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_0469	RBD	DC_0469	1499	1886	Novel HMM	DC_0469	C-terminal	Low	Positional only	48 proteins / 48 hits
IPR030392	CHP	DC_0088	1788	1885	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Lactobacillus phage JNU_P1 [NCBI]	2686379	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Lactobacillus fermentum [NCBI]	1613	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

QHJ74674.1 [NCBI]

Genbank nucleotide accession

MN830252.1 [NCBI]

CDS location

range 17335 -> 22998
strand +

CDS

TTGAACTTCATCAATCTGAGCAGTCAACAAGCACCAAATGATGTTGACTGGGCCGGGCTGGTAAATTCTGGAGTGCAAGGCGTTTTAATCCGGTTGGGGCATGGGATCATCCGTGATCCGTGTGCCAGCGGACATATCGCCAAAGCCAAACAATACGGACTTTACTGGCACGGTTACCACACCTACGAAGGTGTAGTTAATGAACCACAATTTACGATAAAAAATGCAACCGAATTAGGGCTATCCACCAGCCAATACTACTTTGTCGATTTAACCAAGAGTTCCGACCCCTTCAATGACTACTATGCCTTGCACGCCACTTGGTTAAGCCAGGGTTACTCAACTGGACTACTGATCAGTAACGATGATTACCTATCCAAGTTTACGGATAGCGAGGTGACCGCTAGCGGGACCCTCCGTTGGTTAATCAGTGACACCGAACCGGCTAACTACGATGTATGGCAGTATTCAAGCGAGGGGATGGTCGGAACCAGTAGCGCGAAGGTCGGCTTAAACTTTGCGAAGACCGACAAGCTCAAATACAACCTGAATACCACTCTTACAGGGGCTGACATTAACAAAGACCCATACAACCCCCAAACACCCGTCGGTGGTGCCTACATTGGTTGGGGATATGACACAACGGGACTCGGCGGTGGCAAAACTATCGGTTATTCGACCAATGGGGAAAACTTTTACGCCTTAATTGGTCCCAATGGGCTGGTTGTGCGCAAGAGTGACGGTAATCGGATCTATGGAACAATTGCTGATCAAATTGATTCGGCAATTAGTGCTAACGTGATTCCCGCCAAATCCGCTGCTGATAGTGCCGTAGCATATGCCAACGATGCAATTAAAAAGTCGCGAGTCAATAGCCAGGCAATCGACGATATTAACTCGGCTGTAAGCGATGCCGTTTCGGACGCTGCGGTTGCCAGGAGTGATGGCTTACGGGCATGGAATGCCGCGCAGTCAAACGTCAATTTAATTGATCTAAACTATGCGTCGGCCAGTGCGGCGATCTCAAGCGCTCGTACCGAAGCAATTGCGGCGGCTGATGAGGCTAAATCATCGGCGAGTGTAGCACAAGCTGGTGTCGTTGCCGTGAAATCAGACGTAGCAGCGGTTCAGGCAGACGTGACCGCCACACGGTCAGATGTAGCGGTAGCCAAGAGTGATATTGCTGATACCAAGACCACACTTGAGCAGACTGCATCGGGCTTAAACTCTAAGATAAGTGGCGTGGAGACTAGCTTAGCCGACACGACCAGTGCCTTGAGTGACGCTAAGACGGCGCTAACCAGTGATGTGGCGGATGCTAAAAAACTAGCTAACACCGCCCAAGCAACAGCTGACAACGCTGTAAAAAGTGCCTCTAGCGTGGCAGATGATCTAACGGCGGTAGCAAGCCAAGCAAAGGCCAACACAAATGGGATCACGAAGGTAACGTCTGATGTGGGATTATTACAAACCACAGTGGCGAACAACACCGGCGACATTTCAACAATTCAAGAAACAGCGAAGCAAATTCAGCAATCTGTTTCTGATAACGCCGGTAACATCACGGTGGCCAAGCAAACCGCCGACAGTGCTGTTGCGGTAGCTAGTGATGCTAAGAGTAATGCGACGGTAGCTATCCAAACAGCGTCACAAGCTAGCATTACGGCACAAAATGCAAGTGGCCAGGCGGCAAGTGCTGTAATCACAGCTAACGGAGCAATGACCACCGCTAGTGATGCCAAAAGCAATGCCACAGTAGCGGTTCAAACAGCAAGTGGAGCAAGCCTAACGGCAACTAACGCCAATAGCGATGCCACAGTTGCTAAGCAAACCGCAAGCGAGGCCAAAGTCCAGGCGTCAAACGCCGAAAGCGACTTCGCTCAGCTCTCAATCAGAGCTAACAAGATCGAGGCAAATGTTGCCGATAACAGCGGGGCGATCGCAAGCGTGCAACAGACCGCGAACGGGCTGACAACTACGGTAGGTAATGTCGATAATCGAGTTAAAAAGATTGAAGACAATACCAACTGGACGACTAAGACCGGTACGCTTGATATGGACACGTTGACGACTACCCAGAATATCTACTACCGGGACACTAACCTAAAGAACGCCGATGGTGAAGCCGGGTGGGCGTATATTCAAGTGGTAAGTACGGGCGAACGGGTCACACAAACCGTATGGCACGACCGCTCGAGTATCCAACACACACGAACAGGTGCCATAGATGGGTCAACATACGACTGGGACGCCTGGAATCAATCTGCTACTAATTCACAAGTGGCGGAGGTTAAACAGACCGTTGACGGAATTACAACCACGGTCAGCAACATCCAAGGTGACGTTAGCCAACTCAAGGTATCGGCAAGCTCAGCCAGTGTAGCCTTGTCAGACGCGGCCGGTAACATCTCTAACCTTCAGGCAACGGCCAAGTCGTTCAGTGCGGCGTTGTCGGACACTAACAGCAACGTTGCTAGCGTGACTGCAACAGCGAGCGAACTTGAAACCAAGTATGCTGATGCTGCAAACGATATCAGTCAGATCAAGACTGACGCTAAGGGCATGACACAGACAATTAGCAACGCACAAGGCGACATCGCCAAACTCAAGACGCGCGCCGATGGTTTTGACGCTGAGTTTGCGACTGCAAATGGTAATATTAGCAAACTCCAGACGGACGCAACTGGTACTACGCAGACACTTGCTAACACCAAGAGTGATGTGGCTGTATTACAGTCACGGGCTGATGGCCTTGACACCAAGTACGCCAACGCGGCTGGTGATATTAATACACTTAAGGCGAATGCTAGTGGTATTAGCCAAACGCTTACCAACTCGCAAGGTGATATATCCACACTTAAGTCTACGGTGTCCGGCGTTCAAACTACGTTGACCGATGCGCAAGGCAATATCTCTACGCTCCAATCGGACGTGTCGGGGCTAAAAAAGACGACAAGTGATAACGCAGGCAACATCTCCACGTTACAGGCTACCGCCAAGACACTGACCAGTCAGATGAGCGGTGCGCAAGGTGACATCAGCACACTTAAACAGACCGCATCGGACTTTAGCTCTAAAGTTAGCGGTATGGAGACGAGCTTATCCGACGCCAACAGTAAGATTAATGGCATCACCAGTAATGGTGGCGGACGGAATCTGCTACAAGGGACAGGTACGGCAAGCGGTGATGTTGCCGGCGGTAACGGTACTTTTGCCCAAGGTGCTTTTAACGGTTATGATGCGGTTAAAACTAATGGTTGTTGGAGTGAGCATTATCTTGATCTTAAATCAGCCTTAGGCAGAACAAATGCTAAAGCGGGTGACTGGTACACAATTTCCGTTTATGTAAAAGCAGATAAACAAATTGATACTGGTAGCCTTGATGTATATAGGGCGCTTGGTAATGTTGATGCTAATACTAATGACGGTCACCTTGACCCTATCTTGATGCCAAATAAGCCTATAACAACACAGTGGCAACAATATTCTTGGAGTTTCCAGATTAACAACGTTAGTCTTCAACGACAGAATACTCGTGTTGAATACAACTTTGACACTGGAGATAACTGGATATATTGGGCTGGATGGATGCTCGAGAATGGAACTGTTTCCCACGACTGGTCACCAGCTCCGGAAGATACCGATGCTAAAATCACGGCCAACACAACGGCGATCGAACAAAACAAGCAAGCCATTGCACTCAAAGCCGACCAGACAACGGTTGACAAGACCAACGGAACTGTTCAACAGTTGCAGTCACAGCTTCAAGTACAGGCTGGCCAGATTGCGTCTAAGGTATCGAGTAGTGACCTTGATGCTAAGGGCTATGCAACACAAACGTACACACAGACGCAGATCAAGCAGACGTCTGACAGTTGGAACGCCAACCTGGCTTCGGTCAAGGATGGTCTGACGCAGTCGTATACCAACCTGTCGGCAACAGTAAACGGTTTAACAACGACGGTAGGCAATGTCGATGATCGAGTTAAGAAGATTGAAGACAATACTAACTGGACGACTAAGACCGGTGTTCTTGATATGAACACACTGACGACTACCCAGAATATCTACTACCGGGACACTAACCTAAAGAACGCCGATGGTGAAACCGGGTGGGCGTATATTCAAGTGGTAAGTACGGGCGAACGGGTCACACAAACCGTATGGAACGACCGATCGAGTATCCAACACACACGAACAGGTGCCATAGATGGGTCAACATACGACTGGGACGCCTGGAATCAATCTGCTACTAATGCACAAGTAACGGCGATAAAACAAACCGTTGACGGTATCCAGACACAGGTATACAACTCTGACGGCTCGAGCAAAATCACTCAGCTATCAAACTTGATTGCGACAAAGGTATCGAGTGACGATTTTAATAATCTAAGCAAGTCTGTGAACTTGCAGACGCTAGATTCGGCCGATATTAACAATATGAAAACCAACGGGCACTATTTCGTTCATAACCTAGCTAACAACCCAATTGGTGGCTGGGTTTACGTTGATGTAACTGGTAACGGTAATGACCGAATTCGCCAGGACGTTTACCAAGATAGTGGAATTGGACATAAATATCGACGTTTGTTTGGCACTTATTGGACCAACTGGGAAGAAGGTGCAACTTATACTGAGATTAATCAGCTTCAAGATGCCATCAACCTGCGAGTTACCAAAGGCGACCTGATTAGTCAAATCAACCTGCAAGCGGGGACAGCTTTAATTCAATCAAACAAGCTAGTTCTTGATGCCGGGACAACCGTCATCACAGGCGAGGCGTTTATCCCGAGTGCGGCGATCAGCAGCATTAGCGCGGATAAGGTCACGATAGGTTCGTCGTCACTGTACAACTCTGACGGAACATTAAATCTAGTCAATAGTAAAGATGGGACTACCTCCAAAATCACGGTAACACAAGGTAACGTTGATTTCGACGGAATAGAAAAGAACGCGTCCGTCATCCATTTCGCAAGCGATAATAATACAAACGCCTTTACCATTACGCCGGTTGGTGCAACGGTCACACCGACACTTTTCTTTGAGCGATTCGATCAAACCCCCGGGCATTGGCTTGGCTTTACTCGAAACGAAACAGAACACGAAGGTGTTATGTTCCATACGTGGGATGATGATGGTGAGCGATTTTTCGTTGATTGTCACGCGCGATTTGACAAAAACTTAAGAACGCTTGGGACCTTGTCTCAAGGGTCGTGGGATGGCACAACTGCAAAACCTGAAGCCGGAGTTTTAACGATCAAAAATGGTAACACGATCTGGTCGGGGTCAAACTTTCTGGCGATTGGTGATAATCTTAGCAATTCCTATACTAACGTGATGGCTAAGAGCTTTAGTCAACAGTCCACGTTGTCGTCCAAGACCAACATTGAGGAAGTAGATCCGAAGGACGCACTTGATTTGGTCAACCGTACTGACATCAGATCGTACCAGTACACATCTGACGTGGAACAAGGCAAAACTAAGCGCTACACGTCACTAATCCTCGATGACGTGCATGATGTAAGCCAATACTATGCACCGGATGAATTTGCTAATGAGGAACGGACAGGCCGTGACGATGGTTCAGCGGTTGGCTATCTCTTTTTAGCAGTTAAGGAACTCACTAGACGAATTAAAAATTTGGAGGAAAAATTAAATGGATAA

Genome Context

Tertiary structure

PDB ID

8865c206d63a69099b65e8a478818b0e813ef45ff106ae840a8e172401da2d74

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5953

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Identification, characterization, and phylogenetic analysis of eight new inducible prophages in Lactobacillus	Pei,Z., Sadiq,F.A., Han,X., Zhao,J., Zhang,H., Ross,R.P., Lu,W. and Chen,W.	2020	32450182	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature