Protein

View in Explore
Genbank accession
AVO22974.1 [GenBank]
Protein name
tail sheath monomer
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTNGADGLVAKFFKPKNDALAAMDFLVTESYLNLSSVAWVCRMVGPTAKNAVTKGQTAIIIKNSDEFEGVNVSASVTWAGRYPGALANDLVIDVCDSATFPTWEFRNAFAYTPQPGEFHVVVVDTVGRITGTNGATSQVERIQLTGTATAAGKITVNGTDVTYAKDDTAAVVAGKISDKLKALTGEAQIWSDVGYKSNTVTLTLAAIGPQTQSAVVNDANGIVGKISTTTVGSSGTIVPGETFQLLQLNPGAKRTDGSNAYFKDVINGSSYWVYVLANTLAAGRVLLTGGVDDDNIDRIEGYEMLKNAEAYSAKPIFGYADEIGVHQHMIDVSGSRRDTVTFVSPPRDAVVNNRGREADAVEQWRSDLLRDSSYFFMDDNWGYYYDKYNDVYRWIPACGATAGVWARNIRTAGIYKSPAFHNRGKYSGFNKMAWSADSGQRTQLYKVSVNSIVTFPTEGIVLYGDKTGLSAPSAFDRINVRGLFIMAEQNITASAKYYLGENNDANTRLLFTNSIAPYIRTLIGLGAISDGKVKCDEDNNPAAIVAANQMVAGVWLKPAYSINWIYLDFAAVRPDIEFSEVESGGGIVSAS
Physico‐chemical
properties
protein length:591 AA
molecular weight: 63707,70790 Da
isoelectric point:5,21943
aromaticity:0,10152
hydropathy:-0,10948

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
2–164
G3DSA:3.40.50.11780 IPR052042
DC_1098
STR
30–300
DC_1098 IPR020287
G3DSA:3.40.50.11780
STR
227–437
G3DSA:3.40.50.11780 IPR020287
AVO22974.1
1 591
Architecture
STR
TAS
STR 2-437 | TAS 471-569 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVO22974.1
1 591
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,6888
Central domain 163 361 200 0,3221
C-terminal 362 591 229 0,1939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-361
C-terminal
362-591

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM-Bue1
[NCBI] 		2099338 Uroviricota > Caudoviricetes > Pantevenvirales > Nezavisimistyvirus > Nezavisimistyvirus bue1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO22974.1 [NCBI]
Genbank nucleotide accession
MG973030 [NCBI]
CDS location
range 116381 -> 118156
strand -
CDS
GTGACCAATGGTGCTGATGGTCTGGTTGCCAAGTTCTTCAAACCGAAGAATGACGCGCTGGCTGCCATGGACTTCCTGGTCACTGAAAGCTATCTGAACCTTTCTTCTGTTGCCTGGGTATGCCGTATGGTCGGCCCGACTGCGAAGAATGCTGTCACCAAAGGTCAGACTGCGATCATCATCAAAAACAGCGATGAGTTCGAAGGCGTTAATGTCTCAGCATCAGTAACCTGGGCGGGCCGCTATCCAGGCGCTCTGGCGAATGACCTGGTGATCGACGTCTGTGACAGCGCGACATTCCCTACCTGGGAGTTCCGCAACGCGTTCGCTTACACACCACAGCCGGGTGAATTCCACGTTGTTGTAGTCGATACTGTCGGCCGCATCACTGGGACCAATGGCGCGACCTCTCAGGTTGAGCGTATCCAGCTGACTGGTACTGCGACTGCTGCTGGTAAGATCACTGTCAACGGCACTGATGTTACCTATGCCAAAGACGATACTGCTGCTGTAGTCGCCGGTAAGATCTCTGACAAGCTGAAAGCACTGACTGGCGAAGCACAGATCTGGTCTGACGTGGGCTACAAGTCCAACACAGTTACCCTGACCCTGGCGGCTATCGGCCCTCAGACTCAGTCGGCTGTGGTAAACGACGCCAATGGCATCGTCGGTAAGATTTCTACCACCACTGTTGGCTCTTCCGGTACGATCGTCCCTGGCGAGACCTTCCAGCTGCTTCAGCTGAATCCGGGTGCCAAGCGTACTGATGGTTCCAACGCCTACTTCAAAGACGTGATCAACGGTTCTTCTTACTGGGTGTATGTCCTGGCAAACACTCTGGCGGCGGGTCGTGTTCTTCTGACTGGTGGCGTGGACGATGACAACATCGACCGTATTGAAGGTTATGAGATGCTGAAGAATGCCGAAGCATACTCTGCCAAGCCAATCTTCGGTTATGCTGACGAGATCGGTGTTCACCAGCACATGATCGACGTATCTGGATCCCGCCGTGATACTGTGACATTCGTATCTCCTCCGCGTGATGCTGTTGTGAATAACCGTGGCCGCGAAGCCGATGCTGTTGAGCAATGGCGTAGTGACCTCCTGCGTGATTCCAGCTACTTCTTCATGGATGACAACTGGGGTTACTACTACGACAAGTATAACGACGTTTACCGTTGGATCCCAGCTTGTGGCGCTACCGCAGGTGTCTGGGCGCGTAACATCCGCACAGCGGGTATCTATAAGTCCCCGGCGTTCCACAACCGTGGCAAGTACTCTGGCTTCAATAAGATGGCGTGGTCAGCCGATAGCGGTCAGCGCACCCAGCTGTACAAGGTGAGCGTGAACAGCATCGTTACCTTCCCAACCGAAGGCATCGTGCTGTATGGTGATAAGACCGGCCTGAGCGCTCCTTCAGCGTTTGACCGTATCAACGTGCGTGGCCTGTTCATTATGGCTGAGCAGAACATCACCGCGTCTGCCAAATACTATCTGGGTGAGAACAACGATGCCAACACGCGTCTGCTGTTCACTAACTCAATTGCACCGTACATCCGTACACTGATCGGCCTGGGAGCAATCTCAGACGGTAAGGTTAAGTGTGATGAAGATAACAACCCGGCAGCGATTGTGGCTGCTAACCAGATGGTCGCGGGTGTGTGGCTGAAGCCAGCCTACTCCATCAACTGGATCTATCTGGACTTTGCCGCAGTACGTCCAGACATCGAGTTCTCAGAAGTCGAGTCTGGTGGCGGTATCGTTTCAGCGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd537ff621f5145b62a0dc3df199c91558ba83e7586a99d855e37b22c11fca10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6791
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Erwinia amylovora Phages vB_EamP-S2 and vB_EamM-Bue1 Knecht,L.E. — — GenBank