Protein

View in Explore
Genbank accession
APD22282.1 [GenBank]
Protein name
PblB
RBP type
TF
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MRIGEKYTISCYARIASDSPNANVNLLFRSWANNTDLNRKFQKSISHKNWQKYSFTFTADAIENSIQFGQSGAGIIEICAPKIESGTLATDYSEAPEDIEGQISTVESTFKQRANSLDAGVSRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKNGQRQEALQRYTREESARQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNISNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFVNVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKVAKGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRPGAHFFHDSQNISNFFGLQQTFAFEGVRGEKVSVSLLVSKDGSDSYSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDTDEAIRSVQSQLTGSWAVQNINSAGDIISGINLGANGHNRLVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILEAEAVTAEKLKVDNALIKKLTATDAFIDQLISKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSLKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKIIA
Physico‐chemical
properties
protein length:1176 AA
molecular weight: 131275,06810 Da
isoelectric point:8,84269
aromaticity:0,09269
hydropathy:-0,55272

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
1–76
G3DSA:2.60.120.260 Coil G3DSA:2.60.120.260 DC_0720
DC_0909
STR
6–507
DC_0909 G3DSA:2.60.120.260 IPR030392
IPR008979
STR
632–789
IPR008979 IPR030392
DC_0976
RBD
1132–1176
DC_0976
APD22282.1
1 1176
Architecture
STR
RBD
STR 1-1143 | RBD 1144-1176
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP21
[NCBI] 		1916161 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD22282.1 [NCBI]
Genbank nucleotide accession
KY065462 [NCBI]
CDS location
range 31291 -> 34821
strand +
CDS
TTGCGAATTGGTGAAAAGTACACGATTTCTTGTTATGCAAGGATTGCTAGCGATAGCCCAAATGCAAACGTGAACTTGCTATTTCGTTCGTGGGCAAATAATACCGATTTAAATCGCAAATTTCAGAAATCCATCTCTCATAAAAATTGGCAAAAATATTCATTTACATTTACTGCTGATGCAATTGAAAATTCAATTCAATTTGGACAATCTGGCGCAGGAATTATCGAAATATGCGCTCCGAAAATCGAATCAGGAACGTTAGCGACTGATTACAGCGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCGACCTTCAAACAACGAGCCAACTCACTCGACGCTGGTGTAAGCCGTCTGACTGAAGGTCTTAGAACTAAAGTGGATATCAGCGCACTCAACGTGACTGCTGAAAATATTAGGCAGTCGGTGAAGAGTCTTGAGACAGACACGCAGAACAAACTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCAGATAAGACTTTAGTTGTATCTGAAGCTGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGACGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTACCAAAAAGTTACTTTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATTACTGAAGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGATTTATCAGCTATTCAGGAATATGTAAATAAAAACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAAAGCGCGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAGAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATATTTCAAATCGGATAAACAGTAATAAACAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGTGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGTATGGCTCTGACTAATCAACTATTTCAGGTTGAGGTTGGGAAGGTTGCCAAAGGTGGTCGAAATTATATCAGAAATGGTCAATTTAAGAACGGTTCGAAAAACTGGCTTGAATATCAATCTGTTAATTTTGGTTTGAATTTCAACTATCAACACTCTCAAAATCCTAATAATCGAAATCGGCCAGGGGCTCATTTCTTCCACGACTCGCAAAATATCTCTAATTTCTTTGGTTTGCAACAGACTTTTGCTTTTGAAGGTGTTCGAGGAGAAAAAGTGAGTGTATCTCTTCTTGTTTCAAAGGATGGCAGTGATAGCTACAGCGGTTTGAAAGTTGCATTGCACTACATCAAAAACAAAAACATTATTGGGCAAGAGTGGCAAAATATCCCAAGTCCACAAATAACATCGAAGTATAAGCGTTTCACATTTACGTTTACTTTATCAGACGATGTAGAGAATCTGAATTTGATGTTGTTTGGTGAAAAAGGGAAGACCATCAACCTCTATGTTACAGATGTTCAACTCGAAAGAGGTTCTGTCGCGACGGACTACAAAGAAGCTCCTGAAGACACGGACGAAGCGATTCGCTCTGTTCAAAGCCAACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTAGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGAAGCTGAAGCGGTAACTGCTGAGAAGTTGAAAGTTGACAATGCGCTTATTAAAAAATTAACTGCAACTGATGCTTTTATTGACCAACTGATATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGCTCAACCTTCCTAGAAGCCTATCAAGGCCGAATCGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGTATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCTTGAAGTATTGGATGGAACAAAAATCAGATAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGATAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTACATATCGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAATAATAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
71a7a88cf2a20622924ad959dc1cad4d64d612a5a9f370ba3dfc668f3c20891a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3286
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50