Protein

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Genbank accession
WMM94971.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSNARDKANIPALNFSSTGIDDNATSTAITINSSEQVGIGITTPGYPLQINSSAQTTLLHLVSTAGTSSAITFANTGSNDSITIGAENDDLKLRTDDGVIKFFTNENSEKMRIDSSGNVGIGTTSPQQLINIESTGNAKIRYGYSSTVYGEFGRKSNGVHEWSSYENGGDLSFGTSQSNGSTTERMRIEANGNIGIGTSTPAHNLEIVATASGSINDSLQIRNNTTTTGSGSRLRFITSTDENSDANGASIASVRNGNDNDLVFEVENAEAMRIDHAGYVGIGNTVTNSGNAYLTVKPTSTNGRNIAIYTSGSVGNNAGIFFNATEGSGNLAEIKGEYVGTNTGHLKFNTSMSERMRITSAGKVGIGDTAPSGILEVSDADNETYLIVTNAKSGGSGQAILTLRNDVGNWQVKCDTNDTFKIRDNAGATDIVSIDSSSNVQIGNASTSGNGYNLTSSLKAYRNTTSQQEQIEFYNPNGIVGTIKTDGTTTSYNTSSDYRLKENVNYDFDATSRLKQLKPARFNFIADANKILDGFLAHEVSSVVPEAITGTKDAVDEDGNPKYQGIDQSKLVPLLVKTIQELEARITTLEANNP
Physico‐chemical
properties
protein length:594 AA
molecular weight: 62874,79030 Da
isoelectric point:4,80860
aromaticity:0,06061
hydropathy:-0,45505

Domains

Domains [InterPro]
DC_1386
STR
1–179
DC_1386 DC_1367
DC_1386
STR
142–306
DC_1386 IPR030392
IPR030392
CHP
496–548
IPR030392
WMM94971.1
1 594
Architecture
STR
RBD
STR 1-306 | RBD 380-594
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM94971.1
1 594
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0047
Central domain 11 209 200 0,0847
C-terminal 210 594 384 0,9478
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-594

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC168P
[NCBI] 		3072838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM94971.1 [NCBI]
Genbank nucleotide accession
OR420735 [NCBI]
CDS location
range 32531 -> 34315
strand +
CDS
ATGAGTAACGCAAGAGATAAAGCTAACATACCTGCACTTAACTTCTCATCTACTGGTATAGATGATAATGCTACAAGTACAGCTATTACTATTAATTCATCGGAGCAAGTTGGGATTGGTATAACTACTCCAGGCTATCCATTACAAATTAATAGTTCTGCACAAACAACTTTATTACATTTAGTTTCAACAGCAGGAACATCTTCAGCTATAACTTTTGCTAACACAGGTTCTAATGACAGTATTACTATTGGTGCTGAAAATGATGATTTAAAATTAAGAACTGATGATGGAGTTATAAAATTCTTTACTAATGAAAATAGTGAGAAAATGCGTATCGACAGTTCTGGCAACGTAGGTATTGGAACAACTTCTCCACAACAATTAATTAATATTGAAAGCACTGGTAATGCAAAAATAAGATATGGATATAGCTCAACTGTTTATGGTGAGTTTGGAAGAAAATCTAATGGTGTGCATGAATGGTCATCTTATGAAAATGGTGGAGATTTAAGTTTTGGAACTTCGCAATCTAATGGTTCAACTACAGAAAGAATGCGTATTGAAGCAAATGGTAACATAGGTATTGGTACAAGTACTCCTGCACACAATCTTGAAATTGTTGCAACAGCTAGTGGCTCTATAAATGACAGTTTACAAATTAGAAATAATACAACAACTACAGGCAGTGGTTCAAGATTAAGATTTATAACTTCAACTGATGAAAATTCTGACGCAAATGGAGCATCTATAGCATCTGTAAGAAATGGAAATGATAATGATTTAGTTTTTGAAGTTGAGAATGCAGAAGCAATGAGAATAGACCATGCAGGATATGTTGGAATTGGAAATACTGTAACAAATTCTGGTAATGCTTATTTAACAGTTAAACCAACATCTACAAATGGAAGAAATATTGCAATTTATACAAGTGGTTCTGTTGGAAATAATGCAGGAATATTTTTTAATGCAACTGAAGGTTCAGGAAATTTAGCAGAAATTAAAGGAGAATATGTAGGTACAAACACTGGTCATTTAAAATTTAATACATCTATGTCAGAACGTATGCGTATTACTAGTGCTGGTAAAGTAGGTATTGGAGATACAGCTCCTTCAGGAATACTAGAAGTTTCTGATGCTGATAATGAAACTTATCTTATCGTTACTAATGCTAAATCTGGTGGAAGTGGTCAAGCAATATTAACATTAAGAAATGATGTAGGAAATTGGCAAGTTAAATGTGATACAAATGATACTTTTAAAATTAGAGATAATGCAGGTGCAACAGATATAGTAAGTATTGATAGTTCTAGTAATGTTCAAATAGGTAATGCTAGTACATCTGGTAATGGTTATAATCTTACATCAAGTCTTAAAGCTTATCGTAATACAACATCTCAACAAGAACAAATTGAATTTTATAATCCTAATGGAATTGTAGGTACAATTAAAACTGATGGTACAACAACATCCTACAACACTTCATCTGACTATAGATTAAAAGAAAATGTAAATTATGACTTTGATGCAACATCAAGATTAAAACAATTAAAACCTGCAAGATTTAATTTTATTGCAGATGCAAACAAAATACTTGATGGTTTCTTAGCACATGAAGTATCAAGTGTAGTACCAGAAGCAATTACTGGAACTAAAGATGCAGTAGATGAAGATGGTAATCCAAAATATCAAGGTATCGACCAATCTAAATTAGTACCTTTACTGGTTAAAACAATTCAAGAATTAGAAGCTAGAATAACAACACTAGAAGCTAATAACCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8a9b4be70387232502db46c63e1a9c06276f07430451b2565f7c8682b97ad10
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50