Protein

View in Explore
Genbank accession
YP_002925179.1 [GenBank]
Protein name
PblB-type receptor binding
RBP type
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MLYLLNKDVRTVRWNGEPLHEATSAIVKETMNGDFTLTVKYPISDSGIYQLIQEDMLIKAPTPVLGAQLFRIKKPVENNDHLEITAYHISDDVMQRSITPISVTSQSCGMALSRMVQNTKTALGDFSFNSDIQDRRTFNTTETETLYSVLLDGKHSIVGTWEGELVRDNFAMTVKKSRGENRGVVITTHKNLKDYQRTKNSQNVVTRIHAKSTFKPEGADKEITIRVTVDSPLINSYPYINEKEYENNNAKTIEELQKWAQAKFSNEGIDKVSDAIKIEAYELDGQVVHMGDTVNLKSWKHNVDVFKKAIAYEFDALKEEYISLTFDDKAGTGGSRASGGLSSAADAILGVTESAQEIALEKALQNADLDFDHKAGLLRQEIADGVELAKAKSEEVKRQLSDVIDQRFSNFGNGPLQEVKRRAEEALRNAGAGNLLAQEAKRISEQATADITKLKNEVVDGYVGKNTYQEGIRGIERRIEEVKTSTNGQIATQIAEYKQSVDGRFTSLSSQLDSKANLIDFQRVQETSKLYERIIGSTENDISNKVARMALTNQLFQVEVAKNVGDSRNYVKNADFRAGNKNWNESVKPGLNFNYNHSSSNRGKPGAHIYGATDAVYYGLQQQIKFEILEGDIFTVSFLISKDGLSTYSGLNLGVHYRKNNKIISQKWVSIPNSDIPDSKYKKMSYSFVSPKDIDELNMMLFGEQGKRINLYISEVKLETGSKATSFTLAPEDTEEAVRTVQNQLAGSWAVQNINNAGDLVSGLNLGANGHNRLDGKLTHITGETLIDNAVIKSAMIDKLKTANFEAGSVTTTILDAEAVTADKLRVDQAFFNKLVANEAYLSQLFAKQAFINRVKSITIDASQVQSGVLSGDRIYGGTITGSNIYGGTLTGHTKIQLGSYGSFDTTNGGLQINVPRSHNAKDGLGVQFIGSYGRGEDVPYGLFIYKDSDFTTGGYASDSDEFLLTVRGYIKAKGIGWLKTGNGRIDGGTTGTIGLWNSGNVYLSFGGSSNDIYYSYNSTAYSLWSVINKHFSDRRLKDNIVDCKHKALDYIHQFQFKEYDWKKQEDRPQQAHTKIGLIAQEVQEVDPTLVYKNGDTLNLDNLRLTNIALKAIQELALENKKLTQRLENLENERRTA
Physico‐chemical
properties
protein length:1137 AA
molecular weight: 126291,98370 Da
isoelectric point:6,20764
aromaticity:0,08179
hydropathy:-0,48760

Domains

Domains [InterPro]
IPR007119
Unmapped
28–326
IPR007119 Coil Coil G3DSA:2.60.120.260 IPR036388 Coil
DC_0720
STR
71–1133
DC_0720
Coil
Unmapped
242–262
Coil IPR008979 IPR030392
IPR030392
CHP
1033–1091
IPR030392
YP_002925179.1
1 1137
Architecture
STR
STR 71-1133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage PH10
[NCBI] 		644007 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus oralis
[NCBI] 		1303 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002925179.1 [NCBI]
Genbank nucleotide accession
NC_012756 [NCBI]
CDS location
range 24696 -> 28109
strand +
CDS
TTGCTTTATCTACTTAATAAAGATGTGAGAACCGTTCGGTGGAACGGAGAGCCACTTCATGAAGCTACTTCGGCGATTGTTAAAGAGACCATGAATGGCGATTTCACCCTAACTGTGAAATATCCTATTTCTGACTCTGGTATCTATCAGCTCATTCAAGAAGATATGTTGATAAAAGCGCCGACTCCTGTTCTTGGTGCGCAGCTATTTCGCATCAAGAAACCTGTTGAGAACAATGACCATCTGGAAATTACAGCCTATCACATCTCAGACGATGTGATGCAACGTTCTATCACGCCAATTAGTGTGACTAGTCAGAGCTGTGGCATGGCTCTTTCTCGCATGGTCCAAAATACAAAAACTGCTTTGGGTGATTTTTCATTCAATAGCGATATCCAGGATCGTAGGACCTTCAACACGACTGAAACAGAAACTCTGTACTCTGTATTGCTGGACGGTAAGCACAGTATAGTTGGTACATGGGAAGGCGAGCTGGTTCGTGATAACTTTGCGATGACTGTAAAAAAGAGTCGTGGTGAGAATCGTGGTGTTGTTATCACGACACACAAGAATCTTAAAGACTACCAACGCACAAAAAACAGTCAGAATGTTGTCACAAGAATCCATGCCAAATCAACTTTTAAACCCGAAGGCGCTGACAAGGAAATTACTATCAGAGTGACTGTTGATAGTCCTCTTATCAACTCTTATCCTTATATCAATGAAAAAGAGTATGAGAACAACAATGCCAAGACCATTGAAGAATTGCAGAAGTGGGCACAGGCTAAGTTTTCAAATGAGGGCATTGACAAGGTCTCTGACGCTATCAAGATTGAAGCTTATGAACTTGATGGTCAAGTGGTCCATATGGGTGATACGGTCAATCTCAAGAGCTGGAAACATAATGTTGATGTATTCAAGAAAGCTATTGCTTATGAGTTCGACGCCTTAAAAGAAGAATACATCTCTCTGACTTTCGATGATAAGGCAGGAACTGGTGGTTCTAGAGCTTCTGGTGGGCTATCTAGCGCAGCCGATGCAATTCTTGGAGTGACAGAATCTGCACAAGAAATTGCCCTTGAAAAGGCTCTTCAAAATGCTGACTTAGACTTTGATCATAAGGCTGGATTACTGAGACAAGAAATTGCTGACGGAGTCGAACTTGCCAAGGCCAAATCGGAAGAGGTCAAGAGGCAACTGTCTGATGTCATTGATCAGCGATTTAGCAATTTTGGCAATGGTCCACTACAAGAAGTCAAACGCAGGGCTGAAGAAGCATTGCGAAACGCTGGCGCAGGTAATTTGCTAGCTCAAGAGGCTAAGCGAATCAGCGAGCAGGCAACCGCTGATATAACCAAATTAAAAAACGAGGTCGTTGATGGATATGTCGGCAAGAATACTTACCAAGAAGGAATTCGTGGGATTGAGCGACGAATTGAGGAAGTGAAGACATCAACGAATGGCCAAATTGCTACACAAATCGCTGAGTACAAGCAATCAGTAGACGGACGATTCACAAGCTTATCTTCTCAACTTGATAGCAAAGCTAATCTAATTGACTTTCAGCGAGTACAAGAGACTAGCAAGCTTTATGAGAGGATTATCGGTAGTACCGAGAATGACATTTCGAATAAGGTTGCTCGCATGGCTCTGACCAATCAACTATTTCAGGTTGAGGTGGCTAAAAATGTCGGAGATAGTCGAAATTATGTTAAGAATGCTGATTTTCGTGCAGGTAATAAAAATTGGAATGAGTCTGTAAAACCTGGTCTGAATTTCAATTATAACCATTCAAGTAGTAATAGAGGTAAGCCTGGTGCCCATATTTACGGAGCAACTGATGCTGTTTATTATGGCCTACAACAACAAATAAAATTTGAGATTTTAGAAGGGGATATTTTCACTGTCTCATTCTTAATTTCAAAAGACGGATTATCAACTTATAGCGGTTTAAATTTAGGGGTTCATTATAGAAAAAATAATAAAATCATATCTCAAAAGTGGGTTTCTATACCAAATTCTGATATACCTGATTCAAAATATAAAAAAATGAGTTATTCTTTTGTATCTCCAAAAGACATCGATGAACTAAATATGATGCTTTTTGGTGAACAAGGTAAGAGAATTAACCTCTATATTTCAGAAGTGAAACTTGAAACCGGAAGCAAAGCGACATCCTTCACACTAGCGCCCGAAGATACAGAAGAAGCCGTCCGCACGGTTCAAAATCAGCTTGCTGGCTCGTGGGCTGTTCAGAATATCAATAATGCAGGCGATTTGGTTTCAGGTCTCAATCTTGGAGCTAATGGTCACAATCGACTTGACGGTAAATTGACTCATATCACTGGTGAAACCTTGATTGATAATGCAGTCATTAAATCCGCTATGATTGATAAGCTTAAAACCGCTAATTTTGAAGCAGGATCAGTCACGACTACGATTTTAGATGCTGAAGCAGTAACCGCTGACAAGTTGAGAGTTGACCAGGCTTTCTTTAACAAACTGGTGGCAAATGAAGCCTACTTAAGTCAGCTATTTGCCAAGCAAGCCTTCATTAACAGAGTTAAAAGTATCACGATAGATGCAAGTCAGGTTCAGTCAGGTGTTTTGAGTGGTGATAGGATTTACGGTGGGACCATTACAGGTTCAAACATCTATGGTGGAACCTTAACAGGACACACTAAAATCCAACTAGGTTCTTATGGCTCATTCGATACTACAAATGGCGGTTTACAGATTAATGTACCACGAAGCCATAATGCTAAAGATGGGTTAGGAGTGCAGTTCATTGGTTCTTATGGTCGCGGCGAAGATGTTCCTTATGGCCTTTTCATTTACAAGGACTCCGATTTTACTACTGGCGGTTACGCAAGTGATAGTGATGAATTCCTACTGACAGTGAGGGGATACATTAAAGCAAAAGGAATCGGCTGGCTCAAGACAGGGAATGGAAGGATTGACGGTGGAACAACCGGTACTATTGGGTTATGGAACTCCGGCAATGTATATTTGAGTTTTGGTGGTTCAAGTAATGACATTTATTATAGTTATAACAGCACAGCATATAGCCTGTGGTCAGTTATTAATAAGCATTTCTCAGATAGACGTCTGAAAGACAATATCGTTGATTGCAAGCATAAGGCTCTTGATTATATCCACCAATTCCAGTTTAAGGAATATGACTGGAAGAAGCAAGAGGATAGACCACAACAAGCACACACAAAGATTGGTTTGATTGCGCAGGAAGTTCAAGAGGTAGATCCTACACTTGTTTACAAAAACGGAGATACGTTGAATCTGGACAATCTCAGATTAACTAATATCGCACTCAAAGCAATTCAGGAACTTGCTCTTGAAAATAAAAAACTTACACAAAGATTGGAGAACTTAGAAAATGAACGCAGAACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bc85f2a9f8d5cf05f133884c37a033e592d1d6f32a730b5dddd6932e9744efd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of the temperate Streptococcus oralis bacteriophage PH10 van der Ploeg,J.R. 2010-08-28 — GenBank