Protein

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Genbank accession
AXH71439.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,78
Protein sequence
MGSVVSQSIPNFLNGMSQQTPTQRGLNQGEDQVNLQNGLVDGLSKRPPLDYVATLDASNIYSNKTKFWQIQRDADNQYIVALYNGGIKVFDLAGNSKTVTIQSGSSYLTSTNPKEHFKLVNIADYTFIANTQTTVTADSTTSAAKVEEFLVVCKLTNYGREYKVALNHPNMSYEHEVIFQLPSGNDASTDSKFRDTNKITDILLYGHSSTHWDASADGIGFKVVRTDNGSTLSSSQGLANYSGITSHFTFEAFDSVIYGKPTGTVSSPNTLADYTISTADGSGNTAMYAIRDEIQDFSKLPFYGKKDVIIKVTGEEGDTLSDYYVKFTGNSGVWNETIAPATSIGITNSTMPHALINNNNGTFTFKELDWTDRVCGDIETNANPTFVGKKINNLTYYKNRLGILSGENLVFTENASFFNYFATTSTQVLDTDPIDIAASGTQVNTLKNSVGFNESLLLFSDTAQYKLDSAGETISPTTAILNEVSSFEHDDKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGLDISVSVQNLIPSNCYKIVSNTTEDTLVFLSSDAADTQTAPYSGTASATNASTMIIYKYFFDGGEKVQNAWSKWTFTGVKIIGVMSLESHLYVLASEGTTTKLFKIDLRNLKDTTIGHGVYLDLKTSVTGTYSATTDLTTFTSPYGAKTGLLAVDRTNGNDYTATNTSGSTYTIKGNHTSLYIGVPYESKYRLSTPYVRENTGRGLVAVTTGRYQIRNILFNFENSGFFQVEVTPTNRDKSTSIMNGYIIGTSSSIVGQPAIASGTLRVPVQAQNTEFVLDIKSSSHLPMYVAGAEVEGYYHNRANRI
Physico‐chemical
properties
protein length:836 AA
molecular weight: 91206,96990 Da
isoelectric point:5,16913
aromaticity:0,10407
hydropathy:-0,29868

Domains

Domains [InterPro]
IPR058003
TTP
3–836
IPR058003
AXH71439.1
1 836
Architecture
TTP
TTP 3-836
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71439.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9478
Central domain 135 333 200 0,6238
C-terminal 334 836 502 0,3613
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-333
C-terminal
334-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC105P
[NCBI] 		2283018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71439.1 [NCBI]
Genbank nucleotide accession
MH598804 [NCBI]
CDS location
range 22477 -> 24987
strand +
CDS
ATGGGTAGTGTTGTTTCACAATCTATTCCTAACTTTTTGAATGGCATGTCTCAACAGACACCTACTCAAAGAGGATTAAATCAAGGAGAAGACCAAGTTAATTTACAGAATGGTTTAGTAGATGGTTTATCTAAAAGACCACCTTTAGATTATGTAGCAACATTAGATGCTTCAAATATATATTCTAATAAAACAAAATTTTGGCAAATACAAAGAGATGCTGATAATCAATACATTGTAGCATTATATAATGGTGGTATTAAAGTATTTGATTTAGCAGGTAATTCAAAAACAGTTACTATACAAAGTGGTTCAAGTTATTTAACTTCAACTAATCCTAAAGAACATTTTAAATTAGTAAACATTGCTGATTATACTTTTATAGCAAATACACAAACTACTGTAACTGCTGACAGCACAACGTCTGCGGCTAAAGTAGAAGAGTTTTTAGTTGTTTGTAAACTAACAAACTATGGTAGGGAATATAAAGTAGCATTAAATCACCCTAACATGTCTTACGAACATGAAGTAATATTTCAATTACCTTCTGGTAATGATGCGTCAACTGATAGTAAATTTAGAGATACAAACAAAATTACAGATATACTTTTATATGGTCATTCAAGCACACACTGGGACGCTTCGGCTGATGGTATTGGTTTTAAAGTTGTAAGAACAGACAATGGTTCAACTTTATCTAGTTCACAGGGATTAGCAAATTATTCAGGTATAACATCTCATTTTACATTTGAAGCATTTGATAGTGTTATTTATGGAAAACCTACAGGTACAGTTTCATCACCAAACACACTAGCAGATTATACTATAAGTACAGCAGATGGTTCTGGTAACACAGCCATGTATGCTATCAGAGATGAAATACAAGATTTTAGTAAATTACCTTTCTATGGAAAGAAAGATGTAATTATAAAAGTAACTGGTGAAGAAGGAGATACACTATCAGATTACTATGTTAAATTTACAGGTAACTCTGGTGTATGGAATGAAACTATAGCACCTGCTACTTCTATAGGTATAACTAATTCTACAATGCCACACGCATTGATTAACAATAATAATGGCACATTTACTTTTAAAGAATTAGATTGGACTGATAGAGTATGTGGTGACATTGAAACAAACGCTAACCCTACTTTCGTTGGTAAAAAAATTAACAATCTTACATATTATAAAAACAGATTAGGAATTTTATCAGGAGAGAATTTAGTATTTACAGAAAATGCTTCTTTCTTTAATTACTTTGCAACTACATCTACACAAGTTTTAGATACTGACCCTATTGATATAGCGGCTTCAGGCACACAGGTTAACACACTTAAAAACTCTGTAGGATTTAATGAAAGTTTATTATTATTTTCTGATACAGCACAATATAAATTAGATAGTGCAGGAGAGACTATATCACCTACTACAGCTATACTTAATGAAGTATCTTCATTTGAACATGATGATAAAGTAACACCAGTTTCAGCAGGTAAGTTTGCTTACTTTGCACAAGCTAGAACAAACAACACAGCAATAAGAGAATACTTTGCTGATGATGATACATTAACAAATGATGGTTTAGATATAAGTGTATCAGTACAAAATTTAATACCATCTAATTGTTATAAAATTGTAAGTAATACAACAGAAGACACTCTAGTATTTCTTTCGTCTGATGCCGCAGATACACAAACTGCACCATATTCAGGTACAGCTTCAGCAACAAATGCTAGTACAATGATTATCTATAAGTATTTCTTTGATGGTGGTGAGAAAGTGCAAAACGCTTGGTCTAAATGGACATTTACAGGTGTTAAAATTATAGGTGTAATGTCTTTAGAAAGTCACCTTTATGTATTAGCTTCTGAAGGTACTACTACAAAATTATTTAAAATAGATTTAAGAAATTTAAAAGATACTACTATAGGTCATGGAGTTTATCTTGACCTTAAAACTTCAGTTACAGGAACGTATAGTGCCACAACAGATTTAACTACGTTTACCTCACCTTATGGTGCAAAGACTGGATTATTAGCTGTAGATAGAACAAATGGTAATGACTACACAGCTACAAACACAAGTGGTTCTACTTATACAATAAAAGGTAATCACACTTCGTTATACATTGGTGTACCTTATGAAAGTAAATACAGATTATCTACTCCTTATGTCAGAGAAAATACTGGTAGAGGTTTAGTAGCTGTTACTACAGGTAGATACCAAATTAGAAATATATTATTTAATTTTGAAAACAGTGGGTTCTTTCAGGTGGAAGTAACTCCTACAAATAGAGATAAATCAACTTCAATAATGAATGGGTATATCATTGGTACATCTTCATCTATTGTTGGACAACCTGCTATCGCTTCAGGAACATTAAGAGTTCCAGTACAAGCACAAAACACAGAGTTCGTATTAGATATTAAATCATCTTCTCACTTACCTATGTATGTCGCAGGTGCAGAAGTTGAAGGTTATTATCATAACAGAGCAAATAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcd2a89e53fa25f603fe7cfe419116ff62811445abc6f67ef6aad830f7e2cd72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50