Protein

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Genbank accession
YP_009604695.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTVAIQRESGDIIWFDAILNLNISRANQVTQHVVESGASVTDHVIAQNQKMTLSGVVSDADFNLDRPVITAADAQAFGITPKPFVNSTPVTSGPIITPGADTAWTNFLPETVNQFLDLDRPTVVVPAAPKEKGANLIREELDRITRDRERIVLLDFEGSAVRTIFQNVVITSISFKEDPQSGESLYVDLAFEVIRTTTFQTAAIPKKVSESIKNKASEKQAKGKQAPKDEKVTDADGKNPKGETVLHRMTNREVR
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27983,28640 Da
isoelectric point:5,52943
aromaticity:0,05490
hydropathy:-0,31020

Domains

Domains [InterPro]
IPR048494
ATT
15–205
IPR048494
DC_1100
STR
26–255
DC_1100
YP_009604695.1
1 255
Architecture
ATT
STR
ATT 15-205 | STR 206-255
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_G1
[NCBI] 		1983539 Uroviricota > Caudoviricetes > Vandenendeviridae > Nankokuvirus G1 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009604695.1 [NCBI]
Genbank nucleotide accession
NC_041968.1 [NCBI]
CDS location
range 39392 -> 40159
strand +
CDS
ATGACGGTAGCTATTCAACGAGAGTCCGGGGATATCATCTGGTTCGATGCGATTCTGAACCTGAACATCTCCAGGGCCAACCAGGTGACTCAGCACGTGGTAGAATCGGGAGCTTCGGTTACCGACCATGTGATTGCTCAGAATCAGAAGATGACCCTTTCGGGGGTCGTCTCTGACGCCGACTTCAACCTGGACAGGCCAGTTATTACGGCTGCTGACGCACAGGCTTTCGGGATCACCCCTAAGCCTTTTGTCAATAGTACGCCAGTGACATCGGGCCCCATCATCACTCCGGGGGCTGACACGGCCTGGACGAACTTCCTCCCGGAGACGGTCAACCAGTTCTTGGACCTGGACAGGCCAACCGTGGTGGTTCCAGCGGCCCCCAAGGAGAAGGGGGCAAACCTGATCCGAGAAGAACTGGACAGGATCACCAGGGACCGTGAGAGGATTGTCCTGCTGGACTTCGAAGGCTCTGCTGTGAGGACCATCTTCCAGAACGTGGTGATCACCTCGATCAGCTTCAAGGAAGACCCGCAGAGCGGTGAGTCGTTGTATGTGGACCTGGCATTTGAGGTGATCAGGACAACCACCTTCCAGACGGCAGCCATTCCTAAGAAGGTGAGCGAATCGATCAAGAACAAGGCTAGCGAGAAGCAGGCCAAGGGCAAGCAAGCCCCGAAAGATGAGAAGGTAACGGATGCAGACGGGAAGAACCCGAAAGGGGAAACCGTATTGCACAGGATGACTAACCGGGAGGTGCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2e777c1492b64e0041e50318a7975bbf6dd519420078555e8a8bce5bb7cd9ccb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Characterization of a novel bacteriophage and potential to disrupt Pseudomonas aeruginosa biofilms in vitro Qu,K., Xu,Y., Wang,L. and Li,X. 2019-03 — GenBank