Protein

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Genbank accession
YP_009997714.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAITLPGLLKLVGFWPLGTNGWNTEMDKNLFKLSVLCQCTVASRSLAASGFEEDKVYIVPSNAASNANYIAAHNGTSWQYIEPQDGMLVTVLDEAIVLRRKWGEWNTAWYDRANSVGAVTFNSEGAPTGALMESVSGSLGVAEKRASGYCDQIVSATVPADGGAAAWSVNLPVPLKVGAVAVAQATARGGAASVEAWVEPEYPGSVYLKVVGTLPVDTPVDVRVTGRLP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 24116,08720 Da
isoelectric point:4,92774
aromaticity:0,08297
hydropathy:0,12183

Domains

Domains [InterPro]
DC_0438
STR
1–227
DC_0438
IPR021251
STR
28–105
IPR021251
YP_009997714.1
1 229
Architecture
STR
STR 1-227 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PspYZU01
[NCBI] 		1983555 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009997714.1 [NCBI]
Genbank nucleotide accession
NC_052976.1 [NCBI]
CDS location
range 15645 -> 16334
strand -
CDS
ATGGCAATTACTCTCCCTGGCCTGCTGAAACTCGTAGGCTTCTGGCCGCTCGGCACCAACGGCTGGAACACCGAAATGGACAAGAACCTGTTCAAGCTGTCGGTGCTGTGCCAGTGCACCGTGGCCTCGCGCTCGCTGGCCGCGTCCGGCTTCGAGGAGGACAAGGTTTACATTGTCCCGAGCAACGCGGCCTCGAACGCCAACTACATCGCCGCGCACAACGGCACCTCCTGGCAGTACATCGAGCCGCAGGACGGCATGTTGGTGACTGTGCTGGACGAGGCCATCGTGCTGCGGCGCAAGTGGGGTGAATGGAACACCGCGTGGTACGACCGGGCCAACTCGGTGGGCGCCGTCACGTTCAACTCGGAAGGTGCCCCTACGGGGGCGCTGATGGAGTCCGTATCCGGCTCGCTCGGTGTCGCGGAGAAGCGCGCCTCGGGCTACTGTGACCAGATCGTGTCGGCCACGGTGCCGGCAGACGGCGGGGCTGCGGCGTGGTCTGTGAACCTGCCGGTGCCGCTGAAGGTCGGCGCGGTCGCCGTGGCCCAGGCTACTGCACGCGGCGGGGCTGCCTCGGTCGAGGCTTGGGTCGAGCCGGAATACCCTGGCTCCGTGTACCTGAAGGTCGTCGGCACGCTGCCGGTGGACACTCCGGTCGATGTGCGGGTGACGGGTCGGTTGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
913a975e4f56c5232b30b77abdb3a1d077314afabe14562383812b38f18f9ba3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8371
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Pseudomonas strains for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2022 — GenBank