Protein

View in Explore
Genbank accession
WHS04338.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MGVVQNIQVHGAKGGEKKPKAPIEAPDSLRSVAIAKMLIAVGEGEFEGVPTARDIYLDNTPLQDPQGNMNFPNVKWEWRTGAVDQAYIQGIPSVENETTISTELRSGTPWIRAINNVQLSAVRLRFAWPMLQSIDAAGNINGYRIAYKVEVATDGGSYQEVLNEAVDGKTTSVYERTRRINLPPATSGWLLRVTRITPNQNNNKIADTMQIAGFTEVIDAKLRYPNTALLYIEFSAEQFRSIPAVTVETKLKKVLVPANYDPVARTYSGIWDGSFKLAWTDNPTWMTYDITVSDRFGLGRRIRPWQVDKWELYRISQYCDQLVPDGKGGTEPRFICNLNLQSKADAWTLLRDISAIYRGMTYWAQGQVFTLSDMPRDTDFDFAYTRANVIDGKFTYSSASERTRYTRALVSYDNPANNYDTDVTAVTDQKLQRRYGDNPLEISAIGCTRESEAQRRGKWALLTNSRDRAITFKVGLDGRIPLPGYVIPVADELLAGRTVGGRIAAVSGKVITLDRDTQAKAGDRLILNLPDGKCEGRTIQVVSGRQVTVTTAYSAVPERELVWALDADDLAIPLYRVTSVARPEPGVFEISAVQYDPSKFAHIDTGARLEERPISVIPITVVPPPSSVTLTSSSAVDQGIAISTMNISWPAVSGAVGYDVEWRKDSGNWVKLQRTGSTSVDVTGIYAGAYLARVRAVSAFDISSIWKSSDLTNLKGKEGIPPAVAYLNATSELFGIGLKWGFPAGAEDTQRTEIWYGAANSLEDATKLTDLAYPQSDYGLQGLTAGARFFFWARLVDRTGNVGPLYPVGSGVMGQASADAGPILDLIKEKVDESIISKELNERIDLVDGDGPGSVNDRINHAVKDITDALVYDPAKAYAKGDVVRLGQKIYQAQGPVAVGVAPPAEPWQDIATILEEAGALAGEVHQNTLDISELDGVVTAQAEKVDGVFVQLNPLYSGDTGSYAGDNTTSVGVWSVWSAIGEGDYAQGKRTDRVEAKVGENTAAITTLSQAVIDGDSALAEQISTVGVQVEENTAAVQAERQARIDADGVLGREISTVQTNLNGATAAIAENKEAIQDVDGKVSLTWSVRLQYTSATGEYKWAGVGLGLENGPGGLQSKFVIDADMFAIQQGGIVPFAVDGGQVFMRSAFIKDGTITNAKIGDYIQSNDFIEGVQGWRLHKSGSLEFNGQVEGGGRLTMTNQLIQVFDVNRIRVRIGIWK
Physico‐chemical
properties
protein length:1221 AA
molecular weight: 132750,63220 Da
isoelectric point:5,01766
aromaticity:0,08272
hydropathy:-0,22563

Domains

Domains [InterPro]
DC_0014
STR
2–1221
DC_0014
IPR053171
Unmapped
5–1207
IPR053171
IPR055385
ATT
94–220
IPR055385 IPR032876 IPR036116 IPR015406
IPR013783
STR
623–716
IPR013783
WHS04338.1
1 1221
Architecture
STR
ATT
STR
ATT
STR
STR 2-93 | ATT 94-220 | STR 221-343 | ATT 344-507 | STR 508-1221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PseuP_222
[NCBI] 		3043421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas protegens
[NCBI] 		380021 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHS04338.1 [NCBI]
Genbank nucleotide accession
OP626800.1 [NCBI]
CDS location
range 35745 -> 39410
strand +
CDS
ATGGGCGTAGTACAAAACATCCAAGTCCACGGCGCCAAGGGCGGCGAAAAGAAACCCAAGGCACCGATCGAGGCGCCGGACAGCCTGCGCTCTGTAGCCATAGCCAAAATGCTGATTGCGGTGGGCGAGGGCGAGTTTGAAGGCGTGCCGACAGCGCGCGATATCTACCTCGACAACACCCCGCTGCAAGACCCGCAGGGAAACATGAACTTCCCGAACGTTAAATGGGAATGGCGTACCGGGGCAGTGGACCAGGCCTATATTCAGGGCATCCCATCGGTCGAGAACGAGACCACCATCAGCACCGAGTTGCGCAGCGGCACCCCGTGGATTCGTGCAATCAACAACGTCCAGCTTTCGGCCGTGCGCCTGCGCTTTGCCTGGCCGATGCTTCAGTCCATTGATGCGGCTGGCAACATCAACGGTTACCGGATTGCCTACAAGGTCGAGGTGGCCACCGACGGCGGGAGTTATCAGGAGGTCTTGAACGAGGCAGTGGACGGCAAGACCACCAGTGTCTACGAGCGCACCCGGCGTATCAATCTTCCGCCAGCTACCAGCGGCTGGCTGCTCAGGGTGACCCGCATCACCCCGAACCAGAACAACAACAAAATTGCCGACACCATGCAGATCGCGGGTTTCACTGAGGTCATCGATGCAAAGCTGCGCTACCCGAACACCGCGCTGCTCTACATCGAGTTCTCAGCTGAACAGTTCCGCAGCATCCCAGCCGTCACCGTGGAGACCAAGCTGAAGAAGGTCCTTGTGCCGGCCAACTACGACCCTGTGGCCAGGACCTACTCCGGTATCTGGGATGGCAGCTTCAAGTTGGCCTGGACTGACAACCCAACCTGGATGACCTACGACATCACTGTCAGCGACCGCTTCGGTTTGGGCCGTCGCATCAGACCGTGGCAGGTGGACAAGTGGGAGCTGTACCGAATTTCACAGTACTGCGACCAATTGGTGCCAGACGGGAAGGGCGGAACAGAGCCACGCTTCATCTGCAACTTGAACCTCCAGAGCAAGGCCGATGCCTGGACGCTGTTACGCGATATCTCCGCCATCTACCGCGGCATGACCTATTGGGCCCAAGGGCAGGTCTTTACCCTGTCCGATATGCCGCGTGACACCGACTTTGACTTTGCCTACACGCGAGCGAACGTGATCGACGGCAAGTTCACCTACTCCAGCGCATCGGAGCGCACCCGGTACACGCGCGCTCTTGTCAGCTACGACAACCCGGCGAACAACTACGATACCGACGTCACTGCAGTGACCGACCAGAAGCTGCAGCGCCGTTATGGCGATAACCCACTCGAGATCAGCGCGATTGGTTGCACCCGCGAATCCGAGGCGCAGCGCCGCGGCAAGTGGGCGCTACTTACCAACTCCAGGGATCGAGCGATCACCTTCAAGGTTGGCCTGGACGGGCGTATTCCGCTGCCTGGCTACGTCATTCCGGTTGCTGACGAGCTACTGGCGGGCAGGACTGTAGGCGGGCGTATCGCGGCTGTGAGCGGCAAGGTGATCACCCTTGACCGTGATACTCAAGCCAAGGCCGGCGACCGGCTGATTCTGAACCTGCCAGACGGTAAGTGCGAAGGGCGCACCATCCAGGTGGTCAGTGGTCGGCAGGTCACTGTGACCACTGCTTATTCCGCAGTGCCTGAGCGCGAGTTGGTGTGGGCGCTGGATGCTGATGACCTGGCTATCCCTCTCTATCGCGTCACAAGCGTGGCCCGACCGGAGCCCGGGGTGTTCGAGATATCAGCCGTTCAGTACGACCCGAGTAAGTTTGCGCACATCGACACCGGCGCCCGACTGGAAGAGCGCCCAATCAGCGTGATTCCGATCACTGTCGTCCCGCCGCCGTCGAGCGTCACCCTGACATCGAGTTCCGCGGTAGACCAGGGCATCGCAATCAGCACCATGAACATCTCCTGGCCAGCCGTGAGCGGCGCTGTGGGTTACGACGTGGAATGGCGCAAGGATAGCGGCAACTGGGTCAAGCTGCAGCGTACAGGCTCGACCAGCGTAGACGTGACCGGCATTTACGCCGGTGCCTATCTGGCCCGTGTGCGGGCGGTGAGTGCATTTGACATCTCTTCGATCTGGAAGAGCTCCGATCTGACGAATCTCAAGGGCAAGGAAGGGATTCCGCCGGCGGTTGCGTACTTGAATGCCACAAGCGAGCTGTTCGGCATTGGCTTGAAGTGGGGCTTCCCGGCCGGCGCAGAGGATACCCAGCGCACCGAGATCTGGTATGGAGCGGCTAACAGCCTTGAGGACGCCACCAAGCTGACGGATCTGGCCTATCCGCAATCCGACTACGGCCTTCAGGGGCTGACGGCGGGTGCTCGGTTTTTCTTCTGGGCTCGCCTGGTGGATCGGACTGGCAACGTGGGGCCGCTTTACCCGGTGGGGAGCGGGGTTATGGGGCAGGCGAGCGCTGATGCCGGCCCGATCCTTGATCTGATTAAGGAGAAGGTCGACGAAAGCATCATCAGCAAGGAACTGAACGAGCGCATCGACCTAGTCGATGGCGACGGGCCTGGGTCAGTCAACGACCGGATCAATCATGCGGTCAAGGACATCACTGATGCTCTCGTCTATGACCCGGCCAAGGCCTATGCCAAAGGCGATGTTGTGCGCCTGGGGCAGAAGATCTACCAGGCCCAAGGCCCTGTGGCCGTGGGAGTCGCGCCGCCTGCGGAGCCATGGCAAGACATCGCCACCATCCTTGAAGAGGCCGGTGCTCTGGCTGGTGAGGTGCACCAGAACACGCTGGATATTTCGGAGCTGGACGGCGTCGTTACTGCGCAAGCGGAGAAGGTCGACGGGGTGTTTGTCCAGCTCAACCCGCTGTACTCCGGTGACACCGGCAGCTATGCGGGCGACAACACCACCAGCGTCGGAGTCTGGTCGGTGTGGTCCGCCATCGGCGAGGGGGACTATGCCCAGGGCAAGCGAACTGACCGAGTGGAGGCCAAGGTCGGAGAGAACACTGCGGCCATCACTACCCTGTCGCAGGCCGTCATTGATGGTGACAGCGCCCTTGCAGAGCAGATCTCCACCGTCGGCGTTCAGGTAGAGGAGAACACCGCAGCGGTTCAGGCAGAGCGCCAGGCACGGATCGATGCCGACGGCGTTCTGGGGCGCGAGATCAGTACCGTTCAGACGAACCTCAACGGCGCGACCGCGGCGATCGCAGAGAACAAAGAGGCGATCCAAGATGTTGACGGTAAGGTCTCGCTGACTTGGTCGGTTCGCTTGCAGTACACATCAGCAACTGGTGAGTACAAGTGGGCAGGCGTCGGGCTCGGTCTCGAAAACGGGCCAGGGGGATTGCAATCCAAGTTCGTCATTGATGCCGATATGTTCGCCATTCAACAAGGCGGCATCGTGCCGTTCGCGGTGGATGGCGGCCAGGTGTTTATGCGCTCTGCATTTATCAAGGACGGCACTATCACTAACGCAAAAATTGGTGACTATATTCAGTCCAACGACTTTATAGAAGGGGTGCAAGGATGGAGGCTGCATAAGTCCGGAAGTCTAGAATTCAACGGCCAAGTAGAAGGTGGGGGAAGGCTTACGATGACTAATCAGCTAATTCAGGTGTTTGATGTCAATAGGATTCGAGTAAGAATTGGTATATGGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5940d42f1b30163734c5da8a95fdebeac595b5f54e00127d1bfc1b49d9a1f883
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7704
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50