Protein

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Genbank accession
QBX32838.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MELIKIGQVVDDGQGDYLRKGGEKVNKNFTELYTQLGDGDRPFSAGAWKTWDVGILTPKFGESWAVDTSAGAISVNLPKGRPSDYSKAIKLRDVWGTWANMPVTIKAASGDTLKGSPTSKLLDKNLMDVELVYCAPGRWEYVENKRVDRITTSDLSTVAKKEILVQVDGQIDFPDVFGQTDYNISNVEVYLRGNLLYYGDRLNDNSNYGSIDPADALNVLPLDGRSIRIRDIEILAGDTVTVVTYMDGIASYRSSYNIKNLQVFDENQSSKTTINGELWVGDIKTKTDFTVEEFGIDPNQRINPNSLEVMINGILLSRAGSGDLPMFVCEGAFAETQEDCWAAAGNWVPSLDDYQIVMDDNGNITTIRFGKAFENADMLTIRWFNNDIGTLMDWEGTDGIKEHADKVYLNSEQVVNISNRIEYSDFDNPNQQTAVHVPSVFNGRIENIQQMFDLIYPIGTIYENANNPANPSNYMGFGIWQRYAEGRLVAGWTSNQADIEFSMNNNDLDVGGNPSNTAGGTYGSKSVELAQQNIPELSSADKVLVSHPDGNIIIGGCQVDPDATGPGYTKYIESQIAVNKNNTSPANVNILPPIITAYKWVRVG
Physico‐chemical
properties
protein length:604 AA
molecular weight: 66669,51200 Da
isoelectric point:4,48752
aromaticity:0,09272
hydropathy:-0,37550

Domains

Domains [InterPro]
IPR034695
Unmapped
1–604
IPR034695
DC_2238
STR
1–586
DC_2238
IPR036240
STR
2–230
IPR036240 IPR054430 IPR053827
IPR008987
ATT
3–146
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–45
G3DSA:1.20.5.960 IPR027411
QBX32838.1
1 604
Architecture
ATT
STR
ATT
ATT 1-261 | STR 262-450 | ATT 451-603 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX32838.1
1 604
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9272
Central domain 313 511 200 0,1972
C-terminal 512 604 92 0,9231
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-511
C-terminal
512-604

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Asfd_1
[NCBI] 		2562462 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32838.1 [NCBI]
Genbank nucleotide accession
MK577502 [NCBI]
CDS location
range 125228 -> 127042
strand +
CDS
ATGGAATTAATTAAAATCGGCCAAGTCGTTGATGATGGTCAAGGTGATTACCTCCGTAAAGGTGGTGAAAAAGTAAACAAGAATTTCACAGAACTGTACACACAATTGGGCGATGGTGATCGCCCATTTTCTGCTGGTGCATGGAAAACTTGGGATGTCGGTATCCTGACGCCGAAATTTGGTGAGTCATGGGCTGTCGATACAAGTGCTGGTGCTATTTCTGTAAATCTCCCGAAAGGCCGCCCTTCTGATTACAGCAAAGCTATTAAACTCCGTGATGTTTGGGGCACTTGGGCAAACATGCCTGTTACCATCAAGGCTGCAAGCGGTGACACTCTCAAAGGCTCGCCAACCAGCAAATTGCTTGATAAAAACCTGATGGACGTTGAGCTCGTATATTGCGCACCCGGTCGTTGGGAATATGTTGAAAATAAGCGAGTCGACCGAATTACCACATCAGATCTAAGCACGGTTGCCAAAAAGGAAATCCTTGTTCAAGTTGACGGTCAAATTGATTTCCCTGACGTATTTGGACAGACCGATTATAATATTTCAAACGTTGAAGTATATTTGCGCGGTAACCTTCTGTATTACGGGGACCGGTTGAATGATAATTCAAACTATGGTTCAATCGACCCAGCAGACGCGTTGAATGTTCTCCCGCTTGATGGCCGTAGTATTCGTATCCGTGATATTGAAATTCTGGCAGGTGATACTGTTACAGTCGTTACTTATATGGACGGTATTGCTTCTTATCGCAGCTCATACAATATCAAGAATTTGCAGGTATTTGACGAAAATCAGTCCAGTAAAACAACCATTAATGGTGAATTGTGGGTTGGTGATATCAAAACCAAGACGGATTTTACTGTTGAAGAATTTGGTATTGACCCGAATCAACGAATCAACCCAAACTCTTTGGAGGTTATGATCAACGGTATCCTATTGAGCCGAGCTGGTTCAGGTGATTTGCCGATGTTCGTGTGTGAGGGTGCTTTTGCAGAAACACAAGAAGATTGCTGGGCAGCGGCCGGTAACTGGGTTCCATCGCTTGATGACTACCAAATTGTTATGGATGACAATGGTAATATTACGACCATTCGTTTTGGAAAAGCATTTGAAAATGCTGATATGTTGACAATTCGTTGGTTCAACAATGATATTGGCACATTGATGGACTGGGAAGGCACTGACGGAATTAAAGAACATGCCGATAAAGTTTATCTGAATTCAGAGCAAGTTGTGAATATTTCAAATCGAATTGAATATTCCGATTTTGACAATCCGAATCAACAAACTGCGGTTCATGTTCCATCTGTGTTTAATGGTCGAATTGAAAACATTCAACAAATGTTTGACCTGATTTATCCAATTGGGACAATTTATGAAAATGCCAATAACCCAGCAAACCCGAGTAATTATATGGGATTTGGGATTTGGCAGCGTTATGCTGAAGGGCGTTTAGTCGCTGGCTGGACTTCCAACCAAGCCGACATCGAATTCAGTATGAACAATAACGACCTGGATGTTGGCGGTAATCCCAGTAATACAGCTGGCGGTACCTACGGTTCAAAATCAGTTGAATTGGCGCAACAGAATATCCCAGAATTGTCTTCGGCTGATAAAGTACTGGTAAGTCATCCTGATGGTAATATTATCATCGGTGGGTGTCAAGTCGACCCTGATGCCACTGGCCCGGGTTACACAAAGTACATTGAATCACAAATTGCGGTAAATAAAAATAACACATCACCGGCAAATGTTAATATTTTGCCTCCGATTATTACTGCTTATAAATGGGTTAGGGTGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c81bd55893cfaad8fecb2a9d9600f0d8b3f2f39c814b1c292c221e18b792a46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6355
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel lytic T4-like bacteriophage Asfd-1 combating Aeromonas Salmonicida Zhou,Y., Yuan,S. and Ma,Y. 2010-12 — GenBank