Protein

View in Explore
Genbank accession
WPK37740.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MAIPTIPLQIWAESDVVLPNAHTANKISPIADLWDKGWDLGEKPACEELNYVLNMMTWWMSYISTEQIPGMAADYLRKDQNLSDVENKATARTNLEVYSKAEGDNRYVNVEGDTMTGPLTVPRITFPSDASDTAHITTTLGTDQTYLDFVIGDNPGVAGQSNVDIMRFRFVPVNNSATVSPFNMMELNATGTNTALLRVQGNITATGTMTTGTLASTTINNGGNIQTTSLGVSGTATLQNLVVNSNNATVGGRSIVRAVNSTAANANGDLHISIGVSDIRWSGEQNKVNVDFENYGPGGRFARGPDGSVLTGLIDANASGDVYLHDIDEIRFRFLQKALDGIWYTVGL
Physico‐chemical
properties
protein length:348 AA
molecular weight: 37459,35440 Da
isoelectric point:4,57613
aromaticity:0,07184
hydropathy:-0,18937

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV124
[NCBI] 		3077269 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK37740.1 [NCBI]
Genbank nucleotide accession
OR352954.1 [NCBI]
CDS location
range 96508 -> 97554
strand -
CDS
ATGGCAATTCCTACTATTCCTCTTCAGATATGGGCTGAAAGTGACGTCGTGTTACCTAATGCTCATACTGCAAATAAAATCTCCCCTATCGCTGATCTTTGGGATAAGGGTTGGGATTTGGGTGAGAAACCCGCTTGTGAAGAACTTAACTATGTTCTTAACATGATGACTTGGTGGATGTCTTACATTTCCACTGAGCAAATTCCTGGTATGGCAGCCGATTATTTAAGAAAAGACCAGAACTTAAGTGATGTGGAGAATAAGGCCACAGCTCGTACTAATCTAGAGGTCTATAGTAAAGCTGAAGGGGATAATCGTTATGTGAATGTTGAAGGTGACACGATGACAGGTCCTTTGACTGTTCCGCGTATTACCTTCCCATCTGATGCAAGCGATACTGCACACATCACAACCACCTTAGGTACTGACCAAACCTATTTGGATTTTGTAATTGGTGATAATCCGGGTGTAGCTGGACAATCTAATGTTGATATCATGAGGTTCCGCTTTGTTCCTGTAAACAACTCTGCTACAGTTTCACCATTCAACATGATGGAGCTTAATGCAACTGGTACAAACACTGCGCTGTTAAGGGTCCAGGGTAATATTACAGCCACAGGTACGATGACTACAGGAACCTTAGCATCGACAACCATTAATAATGGTGGTAATATTCAGACAACCAGTCTTGGTGTTAGTGGTACAGCTACGTTACAAAACCTCGTAGTAAACTCCAACAACGCAACCGTTGGTGGAAGATCCATTGTTCGTGCAGTAAATAGTACCGCTGCAAATGCCAATGGTGATCTTCATATCAGTATTGGGGTTTCTGACATTCGTTGGAGTGGAGAACAAAACAAAGTCAACGTTGATTTTGAGAATTATGGTCCAGGTGGACGTTTCGCGCGTGGACCTGACGGCTCTGTATTGACTGGCCTGATTGATGCGAACGCCAGCGGAGATGTTTATCTTCACGACATTGATGAGATAAGGTTCAGATTTTTACAGAAAGCTCTTGATGGCATTTGGTATACAGTGGGGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fbc5c394b1fb8b4f3713b0f7430abbc4c9fb5b219c275b40132a31977c47fca7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank