Protein

View in Explore
Genbank accession
QBJ03763.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MKLASFTDNSQSFLKYGDTNTFLHVQISEDGTFVDLTQALAVNVPVANDDGLLFTKTIDPTKLASGDSGIVDINFTSDDQNNLPPDDYYLEIWVTNHDGTIGIYPADENQLMFTITDNLTLITGDVVPAVAFDDFQNMFNTLQQQVHDAIANGLKGNTGEKGDPGEGLDIKGKVTSVSALPTTASEGNGYLVNEELYVYTSGAWKDCGPIQGPQGIQGIQGKTGTGVSSTTIQYQISSSATTAPTGTWSDNIVATTTTNPNLWMKATLHYTDGTTKDFYLVSQKGDKGDKGDRGNQIFNGKQYTPNTSGYWWSDLTPTPSVDNPPKIGDTIINPNGDILQIDTIVVGGVVNGGGTFGVGNVLENIKGATGPQGPVGAGLVVKGTVNSASQLPKTGNQEGYCYFVGTDLYVWDSGAWKNCGSVSPDLKNYVTVTDLNNGLSTKVTDNKNGTIEVNGSSITPADDSKVIHNSGNEEINGQKTFDTAPIDKATGNPYITKSDVSPLIQGAVHDGADLNNELQPGTYFSPTKVTNGPGFYTAGVRDVMITWTVTKVSSSGVTAYTQMAYNQIGNMAVRNFVSGSGLGKWTIIADDSKVLHSTDMRKPASDVAGIEEVNAKQDKIGYTPADDSKVAHLSGANNFNTVPTVNNNPLLLASSLPSDLARTGSDQEFTGKNTFDIAPIDKATGNPYITKDGVPAVPSTLADTTKDANFTGKLQKSGIDVATKSDVTTAISTATANMVDSTKATNFTAGLQSGGIDVATAADLKSVKDSAWRQLDFGPDANLGGALASSYIVYQIHADEKYLSFFYLGVCQSQIRSFSDNTTLMDLSSIVKGISSIDFYNKYTDTISDSNANPVTLKISGTKIITSTSNHRIIVNDPGSILSLSPLNHSDRRIYYTELV
Physico‐chemical
properties
protein length:900 AA
molecular weight: 95580,57140 Da
isoelectric point:4,61057
aromaticity:0,07778
hydropathy:-0,31356

Domains

Domains [InterPro]
DC_1065
STR
108–365
DC_1065 DC_0582 G3DSA:6.10.140.2190
DC_1223
ATT
421–606
DC_1223
QBJ03763.1
1 900
Architecture
STR
STR
ATT
STR 108-365 | STR 382-420 | ATT 421-606 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage ATCCB
[NCBI] 		2510944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ03763.1 [NCBI]
Genbank nucleotide accession
MK504445.1 [NCBI]
CDS location
range 48343 -> 51045
strand -
CDS
ATGAAGTTAGCATCTTTTACGGATAATTCACAATCTTTTTTAAAATATGGTGATACTAACACATTCTTGCATGTTCAAATTTCAGAAGACGGTACATTTGTAGATTTGACACAAGCATTAGCAGTTAATGTTCCAGTTGCAAATGATGATGGATTATTGTTTACAAAAACAATCGACCCAACAAAATTAGCAAGTGGTGATTCGGGAATTGTTGATATTAATTTCACTTCAGATGACCAAAACAACCTACCGCCTGATGATTATTACCTAGAAATTTGGGTTACAAATCATGATGGCACGATTGGGATTTATCCAGCAGATGAAAATCAATTAATGTTTACAATTACTGATAATTTGACATTGATTACTGGTGATGTTGTACCAGCAGTTGCTTTTGATGATTTTCAAAATATGTTTAACACTTTACAACAACAAGTGCATGATGCAATTGCAAATGGATTAAAAGGTAACACAGGTGAAAAAGGTGACCCTGGTGAAGGACTTGACATTAAAGGAAAAGTTACTTCAGTTTCTGCATTACCAACAACCGCAAGTGAAGGTAATGGTTATCTAGTTAACGAGGAACTTTATGTTTATACTAGTGGGGCATGGAAAGACTGCGGTCCAATTCAGGGTCCTCAAGGTATTCAAGGTATTCAAGGAAAAACGGGTACAGGTGTTTCTTCAACTACAATTCAATATCAAATTTCAAGTAGTGCAACTACTGCTCCAACAGGAACTTGGTCAGATAACATCGTTGCTACAACGACTACAAATCCCAATTTGTGGATGAAAGCAACTTTGCATTATACTGATGGCACAACAAAAGACTTTTATCTTGTTTCACAAAAAGGGGATAAAGGCGATAAGGGTGACCGTGGAAATCAGATTTTCAACGGTAAACAGTATACACCAAATACTTCAGGTTATTGGTGGTCTGATTTAACCCCAACACCGTCCGTTGATAATCCTCCCAAAATTGGTGATACCATAATCAATCCGAATGGCGATATTCTCCAAATTGATACTATAGTCGTTGGTGGTGTAGTCAACGGCGGTGGGACTTTTGGAGTAGGAAATGTACTTGAAAATATCAAAGGTGCAACTGGTCCTCAAGGTCCTGTTGGTGCTGGACTAGTTGTTAAAGGTACAGTTAATTCTGCTTCACAACTTCCAAAGACTGGAAATCAAGAAGGTTATTGTTATTTTGTTGGTACAGATTTGTATGTTTGGGATTCTGGAGCATGGAAAAATTGTGGAAGTGTAAGTCCAGACTTAAAAAACTACGTTACTGTTACTGATTTAAACAATGGATTAAGCACTAAAGTTACTGATAACAAAAATGGCACAATTGAAGTTAATGGCAGCTCTATTACACCTGCTGATGACAGTAAAGTTATCCATAATTCAGGTAATGAAGAAATTAATGGTCAAAAAACCTTTGACACTGCGCCAATTGATAAAGCAACAGGCAATCCATACATCACTAAGTCTGATGTGAGTCCATTAATTCAAGGTGCTGTACATGATGGTGCTGATTTAAACAATGAATTACAACCAGGAACTTACTTTAGTCCTACTAAAGTGACTAATGGCCCCGGATTTTACACTGCTGGAGTAAGAGATGTGATGATTACATGGACGGTTACTAAAGTTAGTAGTAGCGGAGTTACTGCCTATACGCAGATGGCATACAACCAAATTGGAAATATGGCCGTACGTAACTTTGTTTCTGGTTCTGGTTTGGGTAAATGGACTATTATCGCTGATGATTCCAAAGTTTTGCACAGTACAGATATGCGTAAACCAGCCAGTGATGTAGCGGGAATTGAAGAGGTTAACGCCAAACAAGATAAAATTGGTTACACTCCGGCTGACGATTCCAAAGTCGCTCACCTATCTGGTGCTAACAACTTTAATACTGTTCCAACTGTTAACAATAATCCGCTATTACTAGCAAGTAGCTTACCAAGCGACCTTGCACGTACAGGTTCAGACCAGGAATTTACGGGTAAGAACACCTTTGATATTGCACCAATTGACAAGGCAACAGGCAATCCGTATATCACTAAGGACGGTGTACCAGCAGTTCCATCAACACTTGCAGATACGACTAAGGATGCCAATTTCACAGGAAAACTTCAAAAGTCTGGAATTGACGTGGCTACTAAGTCTGATGTTACAACTGCTATCAGCACCGCTACTGCAAACATGGTTGACTCTACTAAAGCCACAAACTTTACTGCAGGATTACAGTCAGGAGGTATCGATGTCGCCACCGCGGCTGACTTGAAAAGTGTTAAAGATAGTGCTTGGCGTCAGCTAGACTTTGGGCCAGATGCTAATCTTGGTGGCGCATTAGCCAGCTCATATATCGTTTATCAGATACATGCTGATGAAAAGTATCTTTCCTTCTTTTACTTGGGGGTTTGTCAATCCCAAATTAGATCTTTTTCAGACAATACTACACTGATGGATTTGTCATCGATTGTTAAGGGGATTTCAAGTATTGATTTTTATAATAAATATACAGACACGATAAGCGATTCAAATGCTAATCCTGTTACTTTAAAAATTAGTGGAACAAAAATTATTACGTCAACAAGTAACCATAGGATTATTGTTAATGACCCTGGGTCCATATTAAGTTTATCTCCGCTTAATCATAGTGACCGGAGAATATATTACACGGAGTTAGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c5a134bc93dc771069b2f04c60028d3f7dc14e143cf05d0f4bc98fb9bc1a0440
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank