Protein

View in Explore
Genbank accession
AXG66544.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MANNIQTIVSNKAESWSNAIHIKRYPSGKLKFLVVGGTFENSSDQIEVTADQFGMYNFTVTATPPTKQYEAKHVTVYYDYAGQWTLLQEASRNLLQTLSKTVTPKALMSGFDALYKSDSVDPEFGEAVIAFGAAQNSMAAFDALVPKKLSSVTLNESAFDYKLPVWFVADKATQKIHLFNSPSSADGLIRYKTISQEFAEALAFYSPATHRRTIAIFSSNGVVSRYNVRMEAQPNINLGYRVVRVVLLKAAGAFDPLFAVFDSEGRIHKLDSSFTELSVKSDDYYVNCHESLDAYITRSGKLVGTDVWQTPDAASFFYAFAPGTDDVYAINFADNSLSRYVIKTGVKFNAGTQDGNHLRYPTTFTNPASSVLLEAGSDTTGRKSFVERTLPITDVSSRNWSYLNLMSNGETTPLYGFVARPTLTLTHTYLPTFGATLPTYNVPLGKKVTFNFTATLDDADDSLPIVLPAGIVWTATVNNTPVKTVRNGEQVTVVAEHAYLTAQPFPFSVGRSNGLVEVVPDPLPDPFTFDTIYDVPDYSWQQTVEKQITGVNQRVEFSVLIDGTEQNDRVEVFVNGVKTPAPVFLYNGDKFYLRVKHGYNITLIKVIAGEYETDWGIYTVSEIQFDPVPNRAYAQAGKEYRTVVLTNDGITALALTIDSDDGEFIQGGKEVTLEIGQSTQLLFTPPEPNKKYQIKFGSSRYKYTWDIWTHETWLDAQPAPIYSNGMVVAASDPLKFDEIPPNFLTDISVPAGILFEVDGTDIEAPIDSRAMYKNSFELKDVSCDSILKLESYPAHMQPKILKLGNAEISWLHDFAGTVVYSAQFDSVPDAVDLAELKYAFESRGQDYSTQAASGNDRIPSIFEFAFAIDYAGQEATFNEEYAAALLYRSTQMNLVREEWHLFAAQLMDMPAYGYATESSYGTKDGFTYGDSVYVDSVPGEFSNSFSDLDERVLIVDGVITPRVSKWNEVNIGDAFDVADIAREWNAVSDRIDTTPQIVEPYEPVHQIPAAPVYYVEGTNKGIFPAEPYYIQLTTPAKNETHVMWIQATLVPNYDAFEAAETMAYNYNKVDAAESDWYLPANPSSAHDMDWRNTVDEVHRIDAVNPRPIVYLQPTAEYKPPLPHWFELNPSYEMSPDSHFIFAPLTYKYLADPRQAKSALSYAIGTNIENKVPGNIYNLDTAVERKVDSAAYSHETDHWFKVAPDVYKPKASDAELVSVQVIVAGEYAPRVIENAAYPVERMKVTMFVPKTEYGEQDPLKKGYFATELDALQNAVNVWHKTPDEVFGIQQPDGTWTWAIKIPCGEYCGEFGCDTRGYLAGG
Physico‐chemical
properties
protein length:1320 AA
molecular weight: 147098,88770 Da
isoelectric point:4,74233
aromaticity:0,12424
hydropathy:-0,25720

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA13
[NCBI] 		2283030 Uroviricota > Caudoviricetes > Salmondvirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG66544.1 [NCBI]
Genbank nucleotide accession
MH460460.1 [NCBI]
CDS location
range 111938 -> 115900
strand -
CDS
ATGGCCAATAACATTCAGACAATTGTTTCAAACAAAGCTGAATCTTGGTCAAACGCGATTCATATTAAACGCTATCCTTCCGGCAAACTGAAATTTTTAGTTGTCGGTGGTACGTTTGAAAACTCTTCGGATCAAATAGAAGTAACGGCTGATCAGTTTGGCATGTATAACTTTACTGTCACTGCAACGCCGCCGACGAAACAATATGAAGCCAAACACGTAACTGTTTATTACGACTACGCCGGGCAGTGGACTTTACTGCAAGAGGCGTCTCGTAACTTATTGCAGACTCTCAGCAAAACAGTTACGCCGAAAGCACTGATGAGCGGTTTTGATGCGCTTTATAAATCCGATTCTGTTGATCCGGAATTTGGTGAAGCCGTCATTGCGTTTGGTGCTGCTCAGAATTCGATGGCTGCATTTGATGCGCTCGTTCCGAAAAAACTTTCAAGCGTAACGCTGAATGAATCGGCATTTGATTACAAGTTGCCTGTCTGGTTCGTTGCTGATAAAGCTACGCAGAAGATCCACCTTTTTAATAGTCCGTCTAGTGCTGATGGTTTGATTCGCTATAAAACCATTTCGCAGGAATTCGCAGAAGCACTCGCGTTTTATTCTCCTGCAACGCATCGACGCACGATTGCAATTTTTTCTTCGAACGGTGTAGTTTCTCGCTATAACGTTCGAATGGAAGCGCAGCCAAATATCAATCTCGGTTATCGAGTTGTTCGTGTTGTTCTTCTAAAAGCTGCTGGCGCATTTGATCCGTTATTTGCGGTATTCGATAGCGAAGGCAGAATTCATAAACTTGATTCCTCGTTTACGGAACTCAGTGTTAAGAGTGATGACTATTACGTTAACTGCCACGAAAGCCTTGATGCGTATATTACGCGTAGCGGTAAACTCGTAGGCACTGACGTTTGGCAAACTCCGGATGCTGCAAGTTTCTTTTATGCGTTTGCGCCGGGAACCGATGATGTTTACGCGATTAATTTCGCAGATAACTCTCTTTCTCGTTACGTGATAAAAACAGGCGTTAAGTTTAACGCAGGTACGCAAGACGGAAATCATCTTCGCTATCCAACAACTTTCACCAACCCGGCTTCTTCTGTTTTACTTGAAGCGGGAAGTGATACAACCGGACGTAAAAGTTTTGTCGAAAGAACATTGCCGATTACGGATGTAAGTTCGCGCAACTGGTCTTATTTAAACTTGATGAGCAACGGAGAAACAACTCCGCTTTACGGTTTTGTTGCTCGTCCGACATTAACTCTTACGCATACTTATTTGCCAACCTTCGGCGCAACGTTGCCGACTTATAACGTTCCACTTGGCAAAAAAGTTACGTTTAACTTTACTGCGACACTGGATGATGCAGACGATTCGCTTCCGATTGTTTTGCCTGCTGGCATTGTGTGGACTGCTACGGTCAACAATACTCCGGTAAAAACAGTTCGTAACGGAGAGCAAGTTACTGTAGTTGCAGAGCACGCATATTTAACGGCGCAGCCTTTCCCGTTTAGCGTAGGCCGCTCAAATGGTTTGGTTGAAGTGGTTCCTGATCCGCTTCCTGATCCATTTACCTTTGACACAATTTACGATGTTCCGGATTATAGCTGGCAACAAACAGTAGAAAAACAGATTACTGGTGTGAACCAGCGTGTCGAATTCTCTGTTCTGATTGATGGCACTGAACAGAATGATCGTGTTGAAGTATTCGTTAATGGCGTGAAAACTCCGGCACCTGTGTTCCTGTACAACGGCGATAAGTTTTATTTGCGCGTCAAGCATGGATACAACATCACTTTGATCAAAGTGATTGCAGGAGAGTATGAAACTGATTGGGGAATTTATACTGTTTCGGAAATTCAATTCGATCCGGTTCCTAATCGCGCTTATGCTCAAGCTGGAAAAGAATATCGCACTGTTGTTTTAACTAACGATGGGATCACGGCGCTTGCGCTCACGATTGATTCCGACGATGGGGAATTCATTCAGGGCGGGAAAGAGGTAACGCTGGAGATCGGACAGTCAACACAACTTCTGTTCACGCCACCGGAACCGAACAAGAAATATCAAATCAAATTTGGTAGTTCTCGTTATAAGTATACGTGGGATATATGGACGCATGAAACTTGGCTGGACGCGCAGCCTGCACCAATTTATTCTAATGGGATGGTTGTTGCAGCAAGCGATCCGTTGAAGTTCGATGAAATTCCACCAAACTTTCTTACGGATATTTCTGTACCTGCTGGCATTTTGTTTGAGGTTGACGGCACTGATATTGAAGCGCCGATTGACTCACGCGCGATGTACAAAAATAGTTTTGAGTTGAAGGATGTTTCGTGTGATTCGATTCTGAAACTAGAATCCTATCCGGCACATATGCAACCTAAAATTCTGAAACTAGGTAACGCAGAAATTTCGTGGCTTCATGATTTCGCTGGCACCGTGGTGTATTCCGCGCAATTTGATTCTGTTCCGGATGCTGTTGATTTGGCAGAGTTGAAATATGCTTTCGAATCGCGTGGGCAAGATTATTCTACGCAAGCCGCTTCCGGAAATGATCGGATTCCTTCTATATTTGAGTTTGCTTTTGCAATTGATTATGCAGGACAGGAAGCAACCTTTAACGAGGAATACGCTGCCGCCTTGCTGTATCGTTCAACTCAAATGAATTTAGTTCGTGAAGAGTGGCATTTATTCGCAGCGCAGTTAATGGATATGCCTGCATATGGGTATGCGACCGAATCGAGCTATGGAACGAAAGACGGTTTCACCTACGGCGATTCTGTGTATGTCGATTCTGTTCCGGGTGAGTTTAGCAATTCGTTTTCGGATCTAGACGAGAGGGTTTTAATCGTAGATGGTGTAATCACGCCTCGCGTTTCTAAATGGAACGAAGTGAATATTGGCGATGCTTTTGATGTTGCTGATATTGCGCGTGAGTGGAATGCTGTTTCTGATCGTATTGACACTACGCCGCAAATTGTTGAACCGTATGAACCTGTTCATCAAATTCCGGCTGCTCCTGTTTATTACGTTGAAGGAACCAACAAAGGGATCTTCCCTGCTGAACCATATTACATCCAACTTACTACGCCTGCGAAAAATGAAACTCATGTGATGTGGATTCAGGCGACACTGGTTCCGAACTATGACGCGTTCGAAGCCGCAGAAACTATGGCATATAACTACAACAAAGTTGATGCCGCAGAATCTGATTGGTATCTGCCTGCGAATCCATCATCGGCGCACGATATGGATTGGAGAAACACCGTTGATGAAGTTCATCGAATCGACGCTGTTAATCCGCGTCCTATCGTTTATCTGCAACCTACCGCAGAATATAAACCGCCGTTGCCTCATTGGTTTGAATTGAATCCGTCTTACGAAATGTCGCCGGACTCTCATTTCATTTTCGCACCACTGACTTATAAGTATCTCGCCGATCCACGACAAGCGAAGAGTGCGCTCTCGTATGCCATTGGAACGAATATCGAGAATAAAGTGCCGGGGAATATTTATAATCTCGACACTGCTGTTGAAAGGAAAGTTGACAGCGCTGCTTACAGTCATGAAACGGATCATTGGTTCAAAGTCGCTCCGGATGTTTATAAACCAAAAGCGTCTGATGCTGAATTGGTTTCCGTTCAAGTTATTGTTGCTGGAGAATACGCACCTCGCGTAATCGAAAATGCTGCTTATCCTGTTGAGCGCATGAAAGTGACAATGTTTGTTCCGAAAACTGAATACGGCGAACAAGATCCTCTCAAGAAAGGTTATTTTGCGACTGAACTTGATGCGCTGCAAAACGCTGTCAATGTTTGGCACAAAACACCTGATGAAGTATTTGGCATTCAACAACCCGATGGAACATGGACGTGGGCTATCAAAATTCCTTGCGGGGAATATTGTGGTGAATTCGGTTGTGACACTCGCGGCTATCTCGCAGGTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0a9d2d278bd3006c5de291b61eb41a46951daf3dae7a69f8a1d4ec39b7d7e685
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank