Protein

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Genbank accession
YP_002875748.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAVNNCDTACVIFDVNGSYPQQVDDQRVRLRNAVNIFRMETTDTILYKLILQIQCSVTQVGTALIDLDNRLGGQSVMQTIEDLKLQIQTNRTNITALQNNLTTTNINVTTNKGLIDTALGQLQTQQVSIGALNQSIIDLSKTVGSSIGLTEVTYPSDKLNAQKLYWRVQGGTMFISGKFTTGAGATDKSLLLKLGSIPAEYAPTFLEQGLDLAPGVITLASGKAQPTIGATTYVMGGAGIDAGQIFVSLESATNMPASQTYIINIQYNFVP
Physico‐chemical
properties
protein length:271 AA
molecular weight: 29104,85140 Da
isoelectric point:4,95621
aromaticity:0,05904
hydropathy:0,04686

Domains

Domains [InterPro]
DC_1754
STR
1–271
DC_1754
Coil
Unmapped
80–100
Coil
YP_002875748.1
1 271
Architecture
STR
STR 1-271
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage P087
[NCBI] 		641487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002875748.1 [NCBI]
Genbank nucleotide accession
NC_012663 [NCBI]
CDS location
range 51694 -> 52509
strand +
CDS
ATGGCTGTAAATAATTGCGATACTGCTTGTGTCATCTTTGATGTCAATGGCTCTTATCCACAACAAGTTGATGACCAACGTGTTCGGTTAAGAAATGCCGTTAATATCTTTCGTATGGAAACCACAGATACTATTCTGTATAAACTAATTTTGCAAATACAATGTTCAGTTACACAAGTTGGAACAGCATTAATTGACCTAGATAATCGTCTTGGTGGTCAATCTGTAATGCAAACTATTGAAGATTTAAAACTTCAAATTCAAACTAACCGTACAAACATCACTGCACTTCAAAATAATTTGACCACAACTAATATCAATGTAACTACTAATAAAGGGTTGATTGATACTGCACTTGGTCAATTGCAAACACAACAAGTCAGTATTGGTGCTTTGAATCAATCCATTATTGATTTGAGTAAAACTGTTGGTTCTAGTATTGGTCTAACTGAGGTTACATACCCAAGTGATAAACTTAATGCTCAAAAATTATATTGGAGAGTCCAAGGCGGTACTATGTTTATATCTGGTAAATTCACTACTGGTGCAGGTGCTACTGATAAATCATTACTTTTAAAACTTGGTAGTATTCCTGCTGAGTATGCACCAACATTCTTAGAACAAGGTTTAGATTTAGCACCAGGAGTTATCACTTTAGCTAGTGGTAAGGCTCAACCTACTATTGGTGCTACCACTTATGTAATGGGGGGAGCTGGTATTGACGCAGGTCAAATATTTGTATCGTTAGAATCAGCAACTAATATGCCTGCTAGTCAAACATATATAATAAACATTCAATACAACTTTGTACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c60f6c8bc1c68c60497092b9943b659a17a73f183ebe14be0cb046ca260dba2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50