Protein

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Genbank accession
CAB4183003.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAVTTTVTQVKLVQLDSYVALTQVPTQVKLVQSLQGAQGIPGATGTTGPANTLTIGTVVSGASPAAVITGTAPTQTLSFTLPKGDTGATGATGPTGPQGSIGAAGPTGATGPQGAKGDTGSTGPQGPTGSTGATGSIGPQGPQGVAGNSFTWRSNWSSSITYAAQDAVEGSDGSSYIATASSTNVDPVTDTSHTKWDTLAIKGTVGPVGPIGPTGLTGAAGTNGTNGTNGTNGTNGTNGTNGRGITSIIRTSGTGAAGTTDTFTITYSDATTSTFSVYNGTNGTNGTNGAAGRGITSIARTSGTGAAGTTDTYTITYSDTTTSTYAVVNGANGTNGTNGVDGATGPSGVIAVTAPITNSGTSTSATIGITTGTTAGTVATGNHTHAASDITSGTIAVARIPSYVDPHTSGGLLPMPRWAAQNGVAMATAARAIGNRCVATKTSIGSIYCDLQTIGASSGGDLRFAVWDSSFALVGATGNLATTFNASGTAGLKTITLSVTGLTVGNVYYLGYAIFGFTVYPVLAGGTGYARVSQISPNTSIYVAYSGGTVPALTSASTGLTNQTFLEGN
Physico‐chemical
properties
protein length:569 AA
molecular weight: 55317,84410 Da
isoelectric point:6,39736
aromaticity:0,05624
hydropathy:-0,01019

Domains

Domains [InterPro]
DC_0876
STR
2–279
DC_0876
IPR050149
Unmapped
35–348
IPR050149
IPR008160
STR
87–142
IPR008160
G3DSA:1.20.5.320
STR
120–199
G3DSA:1.20.5.320
CAB4183003.1
1 569
Architecture
STR
STR 2-279 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4183003.1 [NCBI]
Genbank nucleotide accession
LR797042 [NCBI]
CDS location
range 12579 -> 14288
strand +
CDS
ATGGCGGTTACAACGACTGTCACTCAGGTCAAGCTGGTCCAGCTTGATAGCTATGTAGCCCTCACGCAGGTTCCCACGCAGGTCAAGCTGGTTCAATCATTGCAGGGCGCTCAGGGCATACCCGGCGCTACTGGCACAACTGGTCCCGCAAACACGCTGACTATCGGTACGGTTGTAAGTGGAGCCAGTCCGGCGGCCGTGATCACCGGAACCGCTCCAACTCAAACACTAAGTTTTACCCTTCCGAAAGGAGACACTGGTGCTACAGGAGCGACTGGCCCAACAGGACCACAGGGATCGATTGGTGCGGCGGGTCCAACAGGAGCAACTGGGCCGCAGGGCGCGAAAGGCGACACGGGATCAACTGGGCCGCAAGGACCAACCGGTTCTACTGGAGCGACTGGAAGCATTGGCCCGCAAGGACCACAGGGAGTAGCGGGGAACAGTTTTACATGGCGCTCAAACTGGTCATCCTCTATTACTTACGCCGCTCAAGACGCCGTCGAAGGGTCTGATGGTTCGAGCTACATTGCCACCGCTTCAAGCACCAATGTTGATCCTGTAACTGATACGTCTCACACTAAGTGGGACACGTTGGCGATTAAGGGAACCGTCGGCCCTGTCGGACCAATTGGACCAACTGGATTAACTGGAGCGGCGGGCACCAACGGAACCAACGGTACGAACGGAACTAACGGTACCAACGGAACCAACGGCACTAACGGTCGTGGCATCACGTCAATCATTCGCACGTCGGGCACGGGCGCGGCTGGTACCACTGACACGTTCACGATTACGTACTCGGATGCAACCACAAGTACGTTCAGCGTCTACAACGGAACCAATGGGACCAACGGCACCAATGGGGCAGCCGGTCGTGGCATCACGTCGATAGCTCGCACAAGCGGCACGGGTGCAGCCGGAACAACTGACACTTACACGATTACCTATTCGGACACGACTACTTCAACGTATGCAGTGGTCAATGGTGCCAACGGAACAAACGGCACGAACGGGGTTGATGGTGCTACTGGTCCATCAGGGGTCATCGCTGTCACCGCGCCAATCACAAACTCAGGAACCAGCACGTCAGCCACCATTGGAATTACTACTGGCACCACCGCTGGCACAGTTGCCACAGGCAACCACACTCACGCTGCCTCAGACATTACTAGCGGCACAATTGCTGTTGCAAGGATTCCTTCCTACGTTGACCCACATACAAGCGGTGGACTGCTTCCAATGCCTAGGTGGGCTGCCCAAAACGGCGTTGCAATGGCGACCGCCGCCCGTGCAATTGGCAACCGTTGTGTGGCAACCAAGACAAGCATTGGCAGTATTTACTGTGACTTGCAAACTATTGGTGCGTCTTCTGGTGGTGATCTGCGTTTTGCAGTCTGGGACTCATCATTTGCGCTTGTTGGAGCAACTGGCAACCTTGCAACAACATTTAACGCAAGCGGCACAGCCGGACTTAAAACCATTACTTTGAGCGTTACTGGGCTTACAGTAGGCAACGTCTACTATTTAGGTTATGCCATTTTTGGGTTTACCGTGTATCCCGTACTTGCCGGTGGCACAGGCTATGCGCGTGTTTCTCAGATTTCTCCAAACACAAGTATTTATGTTGCCTACAGCGGTGGCACAGTGCCAGCATTAACGAGCGCAAGCACAGGACTTACTAACCAAACTTTCCTTGAGGGCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c98462ca518b02dc8775e1b72441f0b023a32ee5a3ee71a693988e32f85c78e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6780
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50