Protein
View in Explore- Genbank accession
- AYP68591.1 [GenBank]
- Protein name
- putative endopeptidase Spr precursor
- RBP type
-
TSP
- Protein sequence
-
MKNAITAYRPLGVVKFITESGELVPRSTRDPDSSIDLDIINITTTRDMQSDSPTFAIELTLRKPWHRWVASNDLVIIYMSRPPETNRVVFVGLVDDCRKTTSVSGNGVSRSIKVVGRGLAKSLIRFDIGVVPEAEYGFTNTAIGWLEAAGITIAGQKPGDITKAIWDVIVKKHVNYKWGKESLFNYLSLNTKDRENITLLDTSTIMNWQGSIHALIKDVAEDPFYETFYEVNSKGKVELIVRPTPFNKADWEKLPRHHLVDNDVLDDSTGRSDTETFSIYSVGAKTLFSPHDTYKTFGAKPLWNESYADKYGNARLHVETSYMQVADSEDATGEESKATFLQMNTDIYNWNIMNNAMYNGTIVVKGSNKYRLGDRLLYDSAENGTSMEFYITSVQNTIVNYSGNFVTVLGVTRGMNPADRFKAPWGTAKEYSGLGLLPFDPEGALAAIKGDASYRIPGINADMPNGEIDMGSANSVVEMAKDILNSGINGVKVRYVFGGNDARIGSLDCSSFTQYVYKNAVNMDIGRVTGQQVFKGSDISKSQLLPGDLVFFKNTYASTHAFGVSHVGIYIGNDEFIHNSSYAGGITKNKLAEPYWVLHWLKARRVLSQTQLTGGVTGDASTGTGAGSKYVATAYGATALNLGAPDWWVPTGKTATGTRPTEGRTIAVDKTRIPLHSKVRLTCPSFPSVNGEYIAEDVGGAIKGNRIDIYFDDLPPKDARLARTRMLAFGKRDVYIQVLRRGKG
- Physico‐chemical
properties -
protein length: 744 AA molecular weight: 81936,59730 Da isoelectric point: 8,06140 aromaticity: 0,09812 hydropathy: -0,29624
Domains
Domains [InterPro]
DC_0587
STR
1–441
STR
1–441
IPR051202
Unmapped
474–607
Unmapped
474–607
G3DSA:3.90.1720.10
RBD
475–605
RBD
475–605
IPR000064
ENZ
477–607
ENZ
477–607
IPR038765
STR
480–608
STR
480–608
IPR000064
ENZ
493–605
ENZ
493–605
1
744
Architecture
STR 1-441 | STR 473-608 | RBD 609-618 | RBD 630-739 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
744
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 550 | 550 | 0,5430 |
| Central domain | 551 | 733 | 184 | 0,4112 |
| C-terminal | 734 | 744 | 10 | 0,4142 |
Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-550
1-550
Central
551-733
551-733
C-terminal
734-744
734-744
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Exiguobacterium phage vB_EalM-132 [NCBI] |
2419623 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Exiguobacterium alkaliphilum [NCBI] |
1428684 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AYP68591.1
[NCBI]
Genbank nucleotide accession
MH884511
[NCBI]
CDS location
range 60546 -> 62780
strand +
strand +
CDS
ATGAAGAACGCTATTACAGCGTACAGACCCCTAGGAGTAGTTAAATTTATAACAGAGTCAGGGGAACTGGTACCGAGGTCTACTAGAGACCCTGACTCTTCTATTGATTTAGATATAATCAATATAACTACGACTAGAGACATGCAATCTGATTCTCCTACCTTTGCCATAGAGCTAACACTCCGTAAGCCATGGCACAGATGGGTTGCATCTAATGATTTAGTTATCATTTATATGTCAAGACCTCCAGAGACTAACAGAGTAGTGTTTGTAGGTCTAGTTGATGATTGTCGCAAAACTACATCTGTATCGGGGAATGGGGTATCAAGAAGCATTAAAGTAGTTGGTAGGGGTTTGGCTAAGTCTCTTATCAGATTTGATATTGGAGTAGTACCTGAAGCAGAATATGGCTTTACCAATACTGCTATCGGGTGGCTAGAAGCCGCAGGTATTACTATTGCAGGTCAAAAGCCAGGGGATATTACAAAAGCTATATGGGATGTTATTGTCAAGAAGCATGTTAACTACAAGTGGGGCAAAGAGTCTCTATTTAATTACTTATCTCTAAACACTAAAGACAGAGAGAATATCACCCTATTAGATACAAGTACTATTATGAACTGGCAAGGGAGTATACATGCCTTAATCAAGGATGTAGCTGAAGACCCGTTCTATGAGACCTTCTATGAAGTTAATAGTAAGGGAAAGGTTGAATTGATTGTAAGACCAACACCATTCAACAAGGCAGATTGGGAGAAACTTCCTAGACATCACTTAGTAGATAACGACGTTCTGGATGACAGCACAGGACGCTCAGACACCGAAACCTTCTCTATCTACTCTGTAGGGGCTAAGACATTATTTAGTCCACATGATACCTATAAGACCTTCGGGGCTAAGCCTTTATGGAATGAAAGCTATGCAGATAAGTATGGAAACGCTCGTCTACACGTAGAGACATCTTATATGCAAGTAGCTGATTCTGAAGATGCTACAGGGGAAGAATCCAAAGCAACTTTTCTCCAGATGAATACTGACATATACAATTGGAACATAATGAACAACGCTATGTATAACGGCACAATTGTTGTTAAAGGTTCTAATAAATATCGTCTAGGAGACAGATTGCTATATGATTCAGCGGAGAATGGAACTAGTATGGAATTCTATATCACGTCAGTACAGAATACTATAGTCAACTATTCCGGTAACTTTGTTACAGTACTAGGAGTAACTAGGGGGATGAATCCTGCTGACCGATTTAAAGCCCCTTGGGGTACAGCTAAGGAATACAGTGGACTGGGACTGCTACCTTTTGACCCAGAAGGGGCATTAGCAGCTATTAAAGGGGATGCTAGCTATCGTATCCCTGGTATTAATGCTGACATGCCTAATGGAGAAATTGATATGGGTTCAGCCAACTCGGTTGTAGAAATGGCTAAAGACATACTGAACAGTGGTATCAATGGAGTTAAAGTAAGATATGTATTCGGAGGGAATGACGCTCGTATAGGTTCTCTAGATTGTTCATCATTTACTCAATATGTATACAAGAATGCGGTTAACATGGACATCGGTCGTGTAACAGGTCAACAGGTGTTCAAGGGTAGTGATATCAGTAAGTCACAATTACTACCAGGGGACTTAGTATTCTTTAAAAATACTTATGCTAGTACTCATGCTTTTGGAGTATCCCATGTAGGTATTTATATTGGTAATGATGAATTCATCCACAACTCCAGTTACGCAGGAGGTATTACCAAGAATAAGTTAGCAGAACCCTATTGGGTACTACACTGGCTTAAGGCTCGTAGAGTATTATCCCAAACTCAGTTAACGGGTGGAGTTACTGGAGATGCTAGTACAGGGACAGGAGCAGGAAGTAAGTATGTAGCTACAGCATATGGAGCCACCGCATTAAACTTAGGAGCACCTGACTGGTGGGTACCAACGGGTAAAACTGCTACAGGTACTCGTCCAACAGAAGGTAGAACGATTGCCGTAGATAAGACTAGAATACCCTTGCATAGCAAAGTTAGACTTACCTGCCCATCGTTCCCATCAGTAAATGGAGAGTACATTGCGGAAGATGTAGGTGGAGCAATTAAGGGCAATCGTATTGATATATACTTTGATGACCTTCCTCCTAAGGATGCTCGCCTAGCCAGAACAAGAATGTTAGCTTTTGGTAAGAGAGATGTATATATTCAGGTACTCAGAAGAGGGAAAGGGTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
248ed25a9358883ad30188e86411c82456efdce9347d0b9eddaf8d6074d9dcaf
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Comparative Genomic Analysis of Eight Novel Haloalkaliphilic Bacteriophages from Lake Elmenteita, Kenya | Akhwale,J.K. | — | — | GenBank |