Protein

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Genbank accession
AVH85335.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANLVEVPQWEPSIFQIDITTRVLGGTGGPANTQAQQLANRSAYLKSQVDGILATLAAGVPHHTHDAADIISGVLDPARMGLGVANNSTYLRGDGVWATVSQYALPTASSSVIGGIKVGSGLSIDGTGILSTNVTTVAGRTGNIVLAVADVSDAASSSALAASSGSSLIGFISSDTGSLLRTVQTRLRDFYNLKDYGAVGDGVTDDTAAVQAAITAAVTKKKALYVPAGNYMLNSGITINGVLTMYGDGMQNSIFTYVPVNGNAFTWTADGSYSSIRGIKLAHTATRVLGNTATGFKTYTGAACVFYLFDEVWVDGFQLWGYDVNDSFNCKFTNGRIRNNGVQATLAGGGTNGQGGGMHLSRITFTGAATTGNDYSNMYITGNNWGIQVEPSGNNNKAFNTRFDVCIFESNYIGVDLRNLGTGGMGRYQFLNTCYGEANIFALAMLDEGSSVACYQNNTTAGTGTPPSTSLDGPDGINFTARFVEDRPSRFRIGNQGAAPYDRSVATAFSVDKGETTNYVSTIRVLNQGTLQLVGGAGSAVPAVTINSGSGNPEASITANNGSLYMRYNGVDLGTTLYLKVSGTGNTGWLPLGPQYGPTASRPTSAATNKGQFYYDTDILRVVTANGSGAWREYNGLSSVTGTYANIPAGITGANYYATDLFANFTYDGTRWGMQTLPVSFVSVAAAGNATIPTRGGHVLGTTTGSAVATFTLNLPSGTNAASGDRARFTTSCAITALTVSSSASIVNAPSAMSAGQTIEFVYNGSSTTWFRTA
Physico‐chemical
properties
protein length:774 AA
molecular weight: 80413,27980 Da
isoelectric point:5,91963
aromaticity:0,09302
hydropathy:-0,03540

Domains

Domains [InterPro]
DC_2184
STR
147–629
DC_2184
IPR024535
ENZ
190–389
IPR024535
AVH85335.1
1 774
Architecture
STR
STR 147-629 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVH85335.1
1 774
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9689
Central domain 203 494 293 0,9836
C-terminal 495 774 279 0,9317
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-494
C-terminal
495-774

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85335.1 [NCBI]
Genbank nucleotide accession
MG752970 [NCBI]
CDS location
range 274846 -> 277170
strand +
CDS
ATGGCAAATTTGGTTGAGGTTCCACAGTGGGAACCTAGTATATTTCAGATCGACATAACAACTAGAGTTCTAGGTGGTACTGGAGGTCCAGCAAATACACAAGCCCAACAGCTCGCAAATAGATCGGCGTATCTTAAAAGTCAGGTTGATGGAATACTGGCAACTCTTGCGGCGGGCGTTCCTCATCATACACACGATGCTGCTGACATAATTTCGGGAGTTCTAGATCCTGCTCGTATGGGTCTAGGTGTGGCAAATAATTCAACATATCTGCGTGGCGATGGTGTCTGGGCGACAGTATCTCAGTATGCCCTTCCAACTGCTTCGTCAAGCGTTATAGGTGGAATTAAAGTAGGATCTGGACTGTCGATAGATGGTACCGGAATTTTATCTACCAATGTTACCACCGTAGCCGGAAGAACAGGAAATATTGTCTTGGCAGTCGCAGATGTATCTGATGCTGCATCTTCGTCGGCACTTGCTGCTTCATCTGGATCCTCATTAATTGGATTTATTTCTAGCGACACCGGATCATTGCTCAGAACAGTTCAAACGAGGTTAAGAGATTTCTATAATCTTAAGGATTATGGAGCAGTTGGTGATGGTGTTACGGATGATACCGCAGCGGTTCAGGCTGCAATTACGGCGGCCGTTACCAAGAAAAAGGCATTGTATGTTCCTGCGGGTAATTACATGCTTAATAGTGGCATCACTATTAATGGCGTACTCACCATGTACGGTGACGGTATGCAGAATTCCATCTTTACATACGTCCCTGTTAATGGTAATGCCTTCACATGGACAGCAGATGGATCGTATTCAAGCATTCGTGGAATAAAGCTAGCCCATACGGCTACTAGAGTACTTGGTAACACCGCAACAGGATTTAAAACGTATACAGGCGCAGCTTGCGTGTTTTATCTATTTGATGAAGTATGGGTTGATGGTTTCCAGCTGTGGGGCTATGATGTAAATGATAGCTTTAATTGCAAATTCACAAATGGTAGAATTCGCAACAACGGTGTCCAGGCCACATTAGCCGGTGGAGGAACTAACGGTCAGGGCGGAGGTATGCATCTATCACGCATAACTTTCACTGGGGCTGCAACGACAGGTAATGATTATAGCAACATGTATATCACCGGAAATAACTGGGGTATCCAAGTTGAACCATCAGGAAACAATAACAAGGCTTTTAACACTAGATTCGACGTGTGTATCTTCGAGTCGAACTATATCGGTGTAGATCTGCGCAACCTTGGTACGGGTGGAATGGGTCGTTATCAGTTCCTGAACACATGTTATGGTGAGGCCAACATCTTCGCCCTCGCGATGCTGGATGAAGGTAGCAGTGTTGCATGCTATCAGAACAACACCACAGCAGGCACAGGTACTCCACCTTCCACATCGTTGGATGGTCCGGATGGTATTAACTTCACTGCTCGTTTCGTTGAGGATCGCCCATCACGTTTCCGTATTGGTAACCAGGGCGCGGCGCCGTATGATCGTTCAGTGGCTACGGCCTTCTCTGTCGATAAGGGAGAGACGACCAACTATGTGAGCACTATCCGTGTGCTGAATCAAGGTACTCTGCAGCTTGTTGGAGGTGCTGGTTCGGCTGTTCCTGCTGTTACTATTAACTCTGGTTCAGGTAACCCGGAAGCGTCGATTACGGCTAACAATGGCTCCCTGTACATGCGTTATAACGGTGTTGACCTAGGCACAACGTTGTACCTCAAGGTGAGTGGCACGGGTAATACTGGTTGGTTACCTCTAGGACCACAATATGGTCCTACCGCATCCCGTCCTACTTCTGCTGCTACAAACAAGGGTCAGTTCTACTACGATACTGATATTTTGCGTGTAGTTACGGCAAACGGCTCTGGTGCTTGGAGAGAATATAACGGTTTATCTTCAGTAACTGGAACATATGCAAATATTCCGGCTGGCATAACTGGTGCAAATTATTACGCTACTGATTTGTTTGCCAACTTCACATATGATGGCACTAGATGGGGTATGCAAACTCTACCAGTGTCATTTGTTTCGGTGGCTGCAGCGGGTAATGCTACTATTCCTACACGCGGTGGTCATGTTCTAGGAACTACAACTGGATCTGCAGTTGCTACATTCACTTTGAATCTTCCATCTGGCACAAATGCGGCATCCGGTGATAGAGCTAGATTTACTACATCGTGCGCAATCACTGCCTTGACGGTATCATCTAGTGCGTCTATCGTAAATGCGCCATCTGCAATGTCAGCTGGACAGACAATTGAATTTGTTTACAATGGTTCTAGCACCACATGGTTTAGAACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ce69fb2dad6080cc7ca09b939b7d0cb7ce68f9195699190255d17269e6b904e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7211
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank