Protein

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Genbank accession
QIG72523.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MTYLGNRPNLVARSDYSFTATEGQTVFSGVSNDGRILSIDPYNYDIFINGILILQSDIVFATPSTVTLIDGRNANDNVVIRSYGSTAITKSVSDLQASVGRRVGEIVTMFGSDTTPPPGCLLMNGAAVTSTYPELRAHLITIGRPLNGNGDPLLPDMGGYFMRGWTPGQTVDSGRVFGSTQQDAFQGHRFVVSNVSTTTGIVQAGSNDPNSYGSGSRSTGDPVTDGVNGTPRTASETRPTNITVTYWIKAYNAPVDIATINLTNLTNDVVNLQTTKGLKRNAVTTLSGTFIDWPNLPPAINRVTVLIPTLTLSANQTPILQLGISTGIVTTGYTGVITNLGASSMSSAVMNTLGLNFVSGTTVNAYASVTVVINRVTGSAGASTWMMTVDGTYQGSGNSRGNAQVTLPGELASLRLTTVSGTPTMTGNANVMWEF
Physico‐chemical
properties
protein length:435 AA
molecular weight: 45739,77620 Da
isoelectric point:5,70950
aromaticity:0,06897
hydropathy:-0,01264

Domains

Domains [InterPro]
IPR037053
ATT
103–163
IPR037053 DC_1456
SSF88874
STR
104–250
SSF88874
QIG72523.1
1 435
Architecture
ATT
STR
ATT 103-163 | STR 164-435
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_6
[NCBI] 		2509763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72523.1 [NCBI]
Genbank nucleotide accession
MN988524.1 [NCBI]
CDS location
range 173370 -> 174677
strand -
CDS
ATGACCTATCTCGGAAATAGACCAAATTTAGTAGCTCGATCTGACTATTCATTTACTGCGACCGAGGGTCAAACTGTATTCAGTGGCGTCTCAAATGACGGCAGAATTTTAAGTATAGATCCTTACAATTACGATATCTTTATCAATGGTATCTTAATTCTCCAGTCAGATATTGTATTCGCTACTCCATCAACTGTTACTTTAATTGATGGTCGAAATGCTAATGACAATGTTGTCATTAGATCATATGGATCGACTGCTATAACTAAGTCAGTATCTGATCTTCAGGCATCTGTTGGACGTAGAGTAGGTGAGATTGTTACTATGTTTGGTAGTGACACGACGCCTCCTCCTGGATGCCTACTGATGAATGGTGCAGCAGTTACGAGTACATATCCTGAACTCAGAGCTCACTTAATCACGATTGGTCGACCATTGAATGGAAACGGAGATCCACTCCTACCTGATATGGGCGGTTACTTCATGCGTGGATGGACTCCTGGTCAGACTGTGGACTCAGGCCGCGTATTTGGATCAACTCAACAAGATGCATTCCAAGGTCATAGATTTGTAGTTAGTAACGTATCGACAACTACAGGTATTGTCCAAGCAGGTTCAAATGATCCTAACTCATATGGTAGCGGATCAAGAAGTACAGGTGATCCTGTCACCGACGGTGTTAATGGTACTCCTCGTACTGCATCTGAAACTCGTCCTACTAACATTACAGTTACTTACTGGATCAAAGCATATAATGCTCCCGTCGATATTGCAACAATCAATCTAACTAATCTTACTAATGATGTTGTAAATCTCCAGACTACTAAAGGTCTAAAGAGAAATGCAGTAACCACTCTATCCGGTACATTTATAGATTGGCCTAATTTACCACCTGCAATTAATAGAGTCACTGTTCTAATTCCTACATTAACATTAAGTGCTAATCAGACACCAATTCTTCAACTAGGAATTTCAACTGGCATTGTTACTACAGGCTACACTGGAGTTATTACTAATTTAGGTGCTAGTAGTATGAGTAGTGCTGTTATGAATACACTAGGATTAAATTTTGTTAGTGGAACTACAGTCAATGCTTATGCATCAGTAACTGTAGTCATTAACAGAGTAACTGGATCGGCAGGTGCTAGTACTTGGATGATGACAGTGGATGGAACTTATCAAGGTAGTGGTAACTCTCGAGGTAATGCTCAAGTCACACTACCAGGTGAGTTAGCATCACTAAGATTAACTACTGTTAGTGGTACTCCTACGATGACAGGTAATGCTAATGTGATGTGGGAATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
abbaf5112d63e2f83a8384f3dab32553e2172029060db46cd303ad8c1ff5cfe9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank