Protein

View in Explore
Genbank accession
XCO37391.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAFFTQPKGSTIGVLKDGRTIQQAIDGIDKSLAVRLSSKLAQSSGDAKAALDLCYGVAAATSKVVLIDVDCQLSTTTIPTGLEVRIAHGVTVSKIQSSTSAMFNMGNFTSLIGEGSTATIDGSSANSMCALAVGVSNVLLLNLAIRNFKLNGAMFDNCVDTEMRGCSVREIRGGAQEYSCGQYVTNCIRHLSADNVITGVDANGIKFRANSLGLTDGCMSLNDTVRSAGFIGIANGTCKNHLVSGARVFDCVDNGLDMNGCYNAEFNTSLAVRCQDGFYMGENNIDFCRILNCAAEGCKRSGIGSQGSLTNCKVANVDINNCGSGVYCSGFVGLKLIGLSITNSTKRQYLDNETGISKASSGVGIDLQSELSGCYSPKISGCTFHNNEGPAVRLGASGTIGGLSMSDNMFTQSIGGKVSYGGTLVDAMFVNNAGYITDRVYSLQVTGDGVKTDFTVALPEAVLDTSYTINGVVPDWLTTFRVLPGTKTTTLFGISFGTAPPSGSRTIVLSLGRLRPV
Physico‐chemical
properties
protein length:517 AA
molecular weight: 54014,70990 Da
isoelectric point:6,43681
aromaticity:0,06383
hydropathy:0,10909

Domains

Domains [InterPro]
DC_1231
ATT
1–168
DC_1231 IPR012334
IPR011050
STR
62–262
IPR011050 IPR039448
IPR006626
Unmapped
135–157
IPR006626 IPR011050
IPR006626
Unmapped
238–260
IPR006626 IPR006626 IPR006626 DC_0592
IPR006626
Unmapped
374–396
IPR006626
XCO37391.1
1 517
Architecture
ATT
STR
RBD
ATT 1-168 | STR 169-456 | RBD 457-517
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37391.1
1 517
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9676
Central domain 48 437 391 0,9700
C-terminal 438 517 79 0,9883
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-437
C-terminal
438-517

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146006
[NCBI] 		3232191 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37391.1 [NCBI]
Genbank nucleotide accession
PP889461.1 [NCBI]
CDS location
range 37983 -> 39536
strand +
CDS
ATGGCTTTCTTCACTCAACCGAAAGGTTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAACAGGCAATTGATGGCATCGACAAGTCATTAGCAGTGCGCCTTAGTTCAAAATTGGCACAAAGCTCAGGGGATGCGAAAGCGGCGTTAGACCTGTGCTACGGAGTTGCGGCTGCAACGTCAAAGGTGGTTCTTATTGATGTAGACTGCCAACTGTCAACCACAACCATCCCTACCGGACTAGAGGTGAGAATTGCTCACGGAGTGACAGTATCTAAGATTCAGTCGAGCACATCTGCAATGTTCAATATGGGGAATTTTACCTCGCTCATTGGTGAGGGGAGTACAGCAACAATCGACGGCTCCTCTGCGAACTCAATGTGCGCTCTTGCAGTAGGGGTCTCTAACGTTTTACTACTCAACCTCGCGATTAGGAACTTCAAGCTAAACGGCGCTATGTTTGATAACTGCGTAGATACAGAAATGCGCGGGTGCAGTGTTCGAGAGATTAGGGGCGGGGCGCAGGAGTACTCTTGCGGCCAGTACGTGACAAACTGTATCAGGCACTTGTCAGCAGACAATGTGATTACGGGGGTGGATGCAAACGGTATAAAGTTTAGAGCAAACTCCCTAGGTCTTACCGACGGTTGCATGTCATTGAACGACACTGTAAGGTCGGCCGGCTTCATAGGGATAGCCAATGGTACATGCAAAAACCACTTGGTTAGCGGCGCAAGGGTATTTGACTGTGTTGACAACGGTCTTGACATGAATGGTTGCTATAATGCAGAGTTTAACACAAGCCTCGCCGTTCGTTGTCAGGACGGTTTCTACATGGGAGAGAACAATATTGACTTCTGTAGGATACTTAACTGCGCAGCAGAGGGGTGCAAGCGGTCTGGAATAGGCTCACAGGGAAGTTTGACGAACTGCAAGGTTGCCAACGTCGATATAAACAACTGTGGCAGCGGGGTGTATTGCTCCGGCTTCGTAGGATTAAAGCTAATCGGTCTGTCAATAACCAACTCGACTAAGCGTCAATATCTCGATAATGAGACAGGCATAAGTAAGGCGTCAAGCGGGGTAGGAATAGACCTACAATCCGAGCTTAGTGGGTGCTATTCCCCGAAAATAAGCGGTTGCACATTCCACAATAATGAGGGACCTGCTGTTAGACTTGGAGCGTCTGGGACGATTGGCGGACTGTCAATGTCCGACAACATGTTCACGCAGTCCATTGGTGGTAAGGTGAGTTATGGTGGCACACTGGTAGACGCTATGTTTGTCAATAACGCTGGATATATTACGGACAGGGTATACTCGCTCCAAGTGACTGGTGATGGTGTGAAGACCGACTTTACAGTCGCGCTGCCAGAGGCTGTACTTGATACATCCTACACGATTAACGGGGTTGTTCCTGACTGGTTGACTACGTTTCGCGTCCTTCCTGGGACAAAGACTACAACACTCTTTGGTATATCGTTCGGTACGGCGCCGCCGTCCGGCTCGAGAACCATTGTATTATCCTTGGGAAGATTGCGCCCAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a7681974018bf70aecb91da9c8fcb98f226ccbaae3868864b138605e9a8ff77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank